KEGG   Burkholderia ubonensis: BW23_5854
Entry
BW23_5854         CDS       T03794                                 
Symbol
clpV
Name
(GenBank) type VI secretion ATPase, ClpV1 family
  KO
K11907  type VI secretion system protein VasG
Organism
bub  Burkholderia ubonensis
Pathway
bub03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bub00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BW23_5854 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bub02044]
    BW23_5854 (clpV)
Secretion system [BR:bub02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   BW23_5854 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_22 AAA_16 Sigma54_activat AAA_7 nSTAND3 AAA_25 Zeta_toxin NACHT Clp_N AAA_18 TniB T2SSE AAA_24 AAA_14 CbiA Hpr_kinase_C AAA_6
Other DBs
NCBI-ProteinID: AJX14640
Position
III:complement(298222..300966)
AA seq 914 aa
MAISRLALFGKLGGTLFKGVESATAFCKLRGNPYVELVHWLHQLLQQTDSDLHRIVRHAG
IDRDALDRDVARALAALPAGASSISDLSHHIEAAIERAWVLATLRFGDRRIRGAWLVAAL
VSTPDLRRVLLSISPSFDRIPLDQIDALLPAWIEGSPEASDAPHDNSDFAAAVPGEASQA
MPAAAKGSALEQYCTDLTARARDGEIDPVIGRELEIRTMIDVLLRRRQNNPLLTGEAGVG
KTAVVEGLALAIAQGDVPPRLADVRLMSLDVGALLAGASMKGEFEARLKGTLEAAAKSAA
PVILFVDEIHTLIGAGGQAGTGDAANLLKPALARGTIRTIGATTWSEYKRHIEKDPALTR
RFQVLQVPEPEEPAAIHMVRGVAQTFSRHHGVVVRDEAIRAAVTLSHRYIPSRQLPDKAI
SLLDTACARVALSQQAAPRELQDVRQRLQAAHAELALLAQEARIGLAADHALAAARERIA
ALSAEEAAVEARWNAQADAAQALLAAREAALSDAPERPADADDAALAVSTDALRELERAL
AESQGDAPLVFPEVNEAIVAEIVADWTGIPVGRMMTDEIAAVRALPATLGARVIGQPDAL
RQIGERVQTARAGLADPKKPLGVFLLAGPSGVGKTETALALAEALYGGEQNLITINMSEY
QEAHTVSGLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHRDVHEMFFQVFDKG
YMEDGDGRYIDFRNTTILLTSNVGAELSASLCADPARAPDAARLRDALAPELLKVFPAAF
LGRVTVVPYRPLEPAALARIVRLHLERVVRRMADSHRIVLAYEDAVVDYIVGRCLVQETG
ARLLIGFIEQHVLPRLSALWLDAYGAQDALARIDVGVADPAAPAPDALTFRAGHAGDAVD
AASAAAPLFVRQVD
NT seq 2745 nt   +upstreamnt  +downstreamnt
atggcgatttcgcgtctggcgctgttcggcaagctgggggggacgctcttcaagggcgtc
gaatcggcgacggcattctgcaagctgcgcggcaacccctacgtcgagctggttcactgg
ctgcaccagttgctgcagcagaccgactcggacctgcatcgcatcgtccggcacgccggc
atcgaccgcgacgcgctggatcgcgacgtggcccgggcgctcgcggcgctgccggccggc
gcaagctcgatcagcgacctgtcgcatcacatcgaagcggcgatcgaacgcgcgtgggtg
ctggcgacgctgcgcttcggcgaccggcgcatccgcggcgcgtggctcgtcgcggcgctc
gtgagcacgccggacctgcggcgcgtgctgctgtccatttcgccgtcattcgacaggatt
cctctggatcagatcgacgcgctgctgcccgcgtggatcgaaggatcgccggaagcgtcc
gacgcgccgcacgacaacagcgatttcgccgccgcggtgcccggcgaggcatcccaggcg
atgccggccgccgcgaagggctccgcgctcgaacagtactgcaccgacctgaccgcccgc
gcgcgcgacggcgagatcgacccggtaatcggccgcgagctggaaatccgcacgatgatc
gacgtgctgctgcggcgccggcagaacaacccgctgctcaccggcgaggcgggcgtgggc
aagacggccgtcgtcgaagggctcgcgctcgcgatcgcgcagggcgacgtgccgcccagg
ctcgccgacgtgcggctgatgagcctcgacgtcggcgcgctgctcgccggcgcgagcatg
aagggcgaattcgaagcgcgcctgaaaggcacgctcgaggccgccgcgaaatccgccgcg
ccggtcatcctgttcgtcgacgagatccacacgctgatcggcgccggcggccaggccggc
accggcgacgcggcgaacctgctgaagccggcgctggcgcgcggcacgatccgcacgatc
ggcgcgaccacgtggtccgaatacaagcggcacatcgagaaggaccccgcgctgacccgc
cgcttccaggtgctgcaggtgccggagccggaagagcccgccgcgatccacatggtgcgc
ggcgtcgcgcagacgttctcgcggcatcacggcgtcgtggtgcgcgacgaggcgatccgc
gcggcggtgacgctctcgcatcgctacatcccgtcgcgccagttgccggacaaggcgatc
agcctgctcgacaccgcctgcgcgcgcgtcgcgctgtcgcagcaggccgcgccgcgcgag
ctgcaggacgtccgccagcgcctgcaggccgcgcacgccgaactcgcgctgctcgcgcag
gaagcgcgcatcggcctcgcggccgaccacgcgctcgccgcggcccgcgagcggatcgcc
gcgctgtcggccgaggaggcggcggtcgaggcgcgctggaacgcgcaggccgacgccgcg
caggcgctgctcgccgcgcgcgaggcggcgctgtccgacgcgcccgaacgaccggccgat
gcagatgacgccgcgttagccgtgtcgaccgatgcgctgcgcgaactcgagcgcgcgctc
gccgaatcgcagggcgatgcgccgctcgtgttcccggaagtgaacgaggcgatcgtcgcg
gagatcgtcgccgactggaccggcatcccggtcggccggatgatgaccgacgagatcgcg
gcggtgcgcgcgctgcccgccacgctcggcgcgcgcgtgatcggccagcccgatgcgctg
cgccagatcggcgagcgcgtgcagaccgcgcgcgcggggctcgccgatccgaagaagccg
ctcggcgtgttcctgctcgccggcccgtcgggcgtcggcaagaccgagacggcgctcgcg
ctcgccgaggcgctgtacggcggcgaacagaacctgatcacgatcaacatgagcgagtat
caggaagcgcacaccgtgtccggcctgaaaggcgcgccgcccggctacgtcggctacggc
gagggcggcgtgctgaccgaggccgtgcggcgccggccgtactcggtggtgctgctcgac
gagatcgagaaggcccaccgcgacgtgcacgagatgttcttccaggtgttcgacaagggc
tacatggaagacggcgacggccgctacatcgatttccgcaacacgacgatcctgctgacg
agcaacgtcggcgcggaactgagcgcgagcctgtgcgccgaccccgcgcgtgcgccggac
gccgcgcgcctgcgcgacgcgctcgcgcccgagctcctgaaggtgttccccgccgcgttt
ctcgggcgcgtcaccgtcgtcccctaccggccgctcgaacccgccgcgctcgcgcgcatc
gtgcgcctgcacctggagcgcgtcgtgcggcgcatggccgacagccatcggatcgtgctc
gcctacgaagacgcggtcgtcgactacatcgtcgggcgctgtctggtgcaggaaaccggc
gcgcggctgctgatcggcttcatcgagcagcacgtgttgccgcgcctgtccgcgctgtgg
ctcgatgcgtacggcgcgcaggatgcgctcgcgcgcatcgacgtcggcgtcgcggacccg
gccgcgccggccccggacgcgctcacgttccgcgccggccacgcaggcgatgcagttgac
gccgcgtccgcggcggcgccgcttttcgtccggcaggtcgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (22)   
   Pfam (22)   
All databases (29)   

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