KEGG   Burkholderia sp. RPE67: BRPE67_ACDS02470
Entry
BRPE67_ACDS02470  CDS       T03604                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
bue  Burkholderia sp. RPE67
Pathway
bue02020  Two-component system
bue02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:bue00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BRPE67_ACDS02470 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    BRPE67_ACDS02470 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bue03021]
    BRPE67_ACDS02470 (rpoN)
Transcription machinery [BR:bue03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BRPE67_ACDS02470 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_38 HTH_23 HTH_Crp_2
Other DBs
NCBI-ProteinID: BAO85302
Position
1:complement(253300..254817)
AA seq 505 aa
MKASLQLRLSQHLALTPQLQQSIRLLQLSTLELQQEVAMAVAQNPLLENDDDWIASPLRV
AADGSLIAQQGAPSTPSEPMMSNGSTSSTSSSERSESSEPQGVDEYNGLGSDSGQDSSSW
NLEDYGRANNASDDDDLPPLQIHESTTTLRDHLTAQLRMTAANQRDRALVTFLIESLDED
GYLTSSLDEVQTDLPEELEVEIEELSAALALLQSFDPPGVGGRSASECLKLQLLRLDGSP
TRTLALEIVMNHLELLAARDFTRLRKQLKASDDSLRDAHLLIKSLEPFPGAAYGKSEADY
VVPDILVRKTASGWTAELNPEIVPKLRINHLYANILRNNRGDPGSGSLRQQLQEARWLIK
NIQQRFETILRVAQAIVERQKNFFAHGEIAMRPLVLREIADTLGLHESTVSRVTTGKYML
TPFGTLEFKYFFGSHVSTDTGGAASSTAIRALIKQLIGAEDTKTPLSDSRIAELLAEQGF
VVARRTVAKYREALRIPAVNLRKSL
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgaaagccagcctccaactccgcctctcgcagcatcttgcgctgaccccgcaactgcag
cagtcgatccggctgctgcagttgtctacgctcgaactgcagcaggaagtcgcgatggcc
gtcgcccagaacccgctgctcgagaacgacgacgactggatcgcgagcccgctgcgcgtg
gccgccgacggctcgctgatcgcgcagcaaggtgcgcccagcacgccttccgagccgatg
atgagcaacggctcgacatcgtccacgtcgagttccgaacgttcggaaagcagcgagccg
cagggcgtcgacgaatacaacgggctgggttcggatagcggacaagattccagttcgtgg
aatctcgaagactacggccgcgcgaacaacgcatccgacgacgacgatctcccgccgctg
caaatccacgaatcgaccacgacgctgcgcgaccatctgaccgcgcagttgcgcatgact
gcggcgaatcagcgcgatcgcgcgctcgtcacgttcctgatcgagtcgctggacgaggac
gggtatctgacttcgtcgctcgacgaggtgcaaaccgatctgccggaagaactcgaagtc
gagatcgaagaactcagtgcggcactcgcattgctgcaaagtttcgatccgcccggcgtc
ggcgggcgatcggcgtcggaatgcctgaagctgcaattgctgcggctcgacggctcgccc
acgcgcacgctcgcgctcgagatcgtcatgaatcatctggaattgctcgcggcgcgcgac
ttcacgcgtctgcgcaagcaactgaaggcgagcgacgactccctccgggacgcgcatttg
ctgatcaagtcgctggagccatttccgggcgcggcgtatggcaagagcgaagcggactac
gtggtgccggacattctcgtcagaaagaccgcgagcggatggacagccgagctcaatccg
gaaatcgtgccgaagctgcgcatcaatcatttgtacgcgaacattctgcgcaacaaccgg
ggcgatcccggcagtggctcgctgcgtcagcagctccaggaagcgcgctggctgatcaag
aatattcagcagaggtttgaaacgatcctgcgcgtcgcgcaggcgatcgtggagcgtcag
aagaacttttttgcacatggcgaaatcgccatgcggcccttggttttgcgggagattgct
gatacgctgggattacacgagtcgacggtttctcgtgtgaccacaggcaagtacatgctc
accccattcgggacgcttgaatttaagtacttctttggatcgcacgtttcgaccgacaca
ggaggcgcggcatcgtcaacggcgattcgcgcactcatcaagcaactgataggagcggaa
gacaccaaaactcctctttcagacagccgcatcgccgaactgctggcggagcaaggattc
gtggtcgcgcggcgaaccgtcgccaagtatcgcgaagccctcaggatccccgcagtgaat
ctgcgcaagtctctatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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