KEGG   Burkholderia sp. RPE67: BRPE67_ACDS08550
Entry
BRPE67_ACDS08550  CDS       T03604                                 
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
bue  Burkholderia sp. RPE67
Pathway
bue03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bue00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BRPE67_ACDS08550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bue03400]
    BRPE67_ACDS08550
Enzymes [BR:bue01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     BRPE67_ACDS08550
DNA repair and recombination proteins [BR:bue03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BRPE67_ACDS08550
SSDB
Motif
Pfam: AAA_19 AAA_30 AAA_11 UvrD_C_2 Viral_helicase1 Helicase_RecD SH3_13 UvrD-helicase RecD_N AAA_22 SLFN-g3_helicase DEAD MdcG_N MukB AAA_25 T2SSE CbiA GvpD_P-loop Flavi_DEAD
Other DBs
NCBI-ProteinID: BAO85910
Position
1:935864..937825
AA seq 653 aa
MSTPAVTPDLVERAGADESAALAEGFARRMKALATRLDADERGVLWAERAALALSRATAQ
GHVCLPLAALARRHDERFHEARDALLASGVACLVRDDAREDAADLLPLVIDEDGRLYLAR
YFDYERRLAEALVERSRGSGAQMPPRAIEAQATRIARYFGPRAGDEIDWQRVAAFVALAG
RLTIVSGGPGTGKTTTVVGVLACLLDDDPQLRIALAAPTGKAAQRMQEALIERADKLPPE
LAARLPRTSFTLQRLLGVQADGRFRHHRDNPLPYDVIVVDEASMIDVALAAHLLEAVAPL
SRLVMLGDKDQLSAVEAGAVFAELSAEPSFSGAGVARIASALALDVKRLQAVLLHAEAPA
SDPQLGLFDAPPEAPGPASALTDCVVWLQKNYRFGLDSDIGRLSIAIRDGDEKAALHALD
ASGERAAALFDDGDTALSERTLARLAKGFAPYAHALLAVLEDEDADHAQLFDALNRYRVL
CATRKGPRGVDEVNARIAAKVREQAGIALALGAQWFAGRPVIVTRNDYALGLFNGDIGIA
LPGADGLLRVAFRMADGALRYVSPAALPPHDTAFALTVHKSQGSEFEHASLVLPGVFVRV
LSRELVYTAITRAKRRIDVIGSAAIFAQAVREPTQRDSGLAARMQRLSREIER
NT seq 1962 nt   +upstreamnt  +downstreamnt
atgagtacgcccgctgtcacgcccgatctcgtcgaacgcgcgggcgcggacgaaagcgcc
gcgctcgcggaaggcttcgcgcggcgcatgaaggcgctcgcgacgcggctcgacgccgac
gaacgcggcgtgctgtgggccgagcgcgccgcgctggcgttgagccgcgccaccgcgcag
ggtcacgtctgcttgccgctcgccgcgctcgcgcgccgtcatgacgagcgctttcacgag
gcgcgcgacgcgttactcgcgagcggcgtggcgtgcctcgtgcgcgacgatgcgcgtgag
gacgcggctgatctgctgccgctcgtcatcgacgaggatgggcggctctatctcgcgcgt
tacttcgattacgagcggcggctcgcggaggcgctcgtcgaacgctcgcgcggctcgggt
gcgcagatgccgccgcgggctatcgaagcgcaggctacgcgcatcgcgcgctatttcggc
ccgcgcgccggcgacgagatcgactggcagcgcgttgccgcattcgttgcgctggcgggg
cggctgacgatcgtgagcggcggcccgggcaccggcaagaccacaaccgtcgtgggcgtg
ctcgcgtgcctgctcgacgacgatccgcaactgcgcatcgcgctcgccgcgccgaccggc
aaggccgcgcagcgcatgcaggaagcgctgatcgagcgcgccgacaagctgccgcccgaa
ctcgccgcgcggctgccgcgcacctcgttcacgttgcaacggctgctcggcgtgcaggcg
gacgggcgcttccggcatcatcgcgacaatccgctgccgtacgacgtgatcgtcgtcgac
gaagcctcgatgatcgacgtcgcgctcgcggcgcacctgctcgaagccgtcgcgccgttg
agccggctcgtgatgctcggcgacaaggatcagctttcggcggtcgaggcgggcgcggtg
ttcgcggaactgagcgccgagccgtcgttcagcggcgcgggcgtcgcgcggatcgcgtcg
gcgctggcgctcgacgtgaagcggcttcaggccgtgttgctgcatgccgaagcaccggcg
agcgatccgcagctcggacttttcgacgcgccgccggaagcgcccggcccggcatccgcg
ctgaccgattgcgtcgtctggttgcagaaaaactatcgcttcgggctcgattcggacatc
gggcgtttgtcgatcgcgatccgcgacggcgacgaaaaggccgcgcttcatgcgctcgac
gcttccggcgaacgcgccgccgcgcttttcgacgatggcgacacggcgctctccgagcgc
acgctcgcgcgtctcgcgaagggcttcgcgccgtatgcgcacgcgctgttggcggtgctc
gaagacgaagacgccgatcacgcgcaactcttcgacgcgctcaaccgctatcgcgtgctg
tgcgcgacccgcaagggaccgcgtggcgtggacgaagtgaacgcgcgcatcgccgcgaag
gtgcgcgaacaggcgggcattgcgcttgcgcttggtgcgcagtggttcgccggacgaccg
gtgatcgtcacgcgcaacgactatgcgctcgggcttttcaatggcgatatcggcattgcg
ctgccgggcgcggacgggctcctgcgcgtcgcgttccgcatggccgatggcgcgctgcgc
tacgtgtcgcccgccgcgctgccgccgcacgataccgcgttcgcgctgaccgtccacaag
tcgcagggctcggagttcgagcatgcgtcgctcgtgttgcccggcgtgttcgtgcgcgtg
ttgtcgcgcgagctggtgtatacggcgatcacgcgcgcgaagcgcagaattgacgtgatc
ggctcggcggcgatctttgcgcaggcggtgagagaaccgacgcaacgcgattccgggctg
gccgcgcgcatgcagcgcttatcgagggaaatcgaacgatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (19)   
   Pfam (19)   
All databases (28)   

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