KEGG T01424: BC1001

Burkholderia sp. CCGE1001: BC1001_1445

Entry

BC1001_1445       CDS       T01424

Name

(GenBank) phage SPO1 DNA polymerase-related protein

K21929

uracil-DNA glycosylase [EC:3.2.2.27]

Organism

bug Burkholderia sp. CCGE1001

Pathway

bug03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:bug00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BC1001_1445
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bug03400]
    BC1001_1445
Enzymes [BR:bug01000]
3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     BC1001_1445
DNA repair and recombination proteins [BR:bug03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BC1001_1445

SSDB

Motif

Pfam:

DUF4130 UDG

Other DBs

NCBI-ProteinID:

ADX54881

Position

1:complement(1652129..1653601)

AA seq 490 aa
MLRRIEIDNHFEAWRAASLAALAHGLAPEAIEWRIRESAGAKPLAGQTAFDYGETGGNGS
AAQAPAVHVSKDLAALLHDAALYREPQRWAFLYKVLWRWQHGDRTVASPADVDGARLYHM
AKCVRRARHDMIAYMRFRKQQSDASGPEYIAWYEPEHDVLGWAAEHFAQRMGRSSWMIAT
PHGAAFWDGSQLHIEARHALRDPHHSDANDEAESLWLAYYRSTFNPARLNEAALQQHMPV
RFWKGLPEGRLIPAMLSEARTGARRVAQASGVTALGGKAIPVEAESAQPARAQPSSLNAC
RRCVLWRHATQAVGGAGPRPAPIMLIGEQPGDQEDLSGEPFVGPAGQLLNSAIARAGLTR
DELYLTNAVKHFKWEPRGKRRLHKTPAQREVEACSHWLAHEFATVRPSVVVVLGATALHA
LLRESASLSDYLSEPFELEGGWGIATYHPSFALRQRDGAAREKVTADITGALIKARQLAA
SLEAGPRRAR

NT seq 1473 nt +upstreamnt +downstreamnt
gtgctccgtcgcattgaaatcgacaaccactttgaggcatggcgtgccgcttcgctcgct
gcactcgctcatgggctcgcgccggaggcgatcgagtggcgcattcgcgagagtgccggt
gcaaagccgctagccgggcagacggctttcgactatggcgagaccgggggcaacgggtcg
gcggcgcaagcgcccgcggtccacgtgtcgaaggacctcgcggcgttgctgcacgacgcc
gcgttgtaccgggagccgcagcgctgggcgtttctctacaaggtgttatggcgctggcaa
cacggcgaccgtacggtcgcgtcgccggcggatgtcgacggtgcgcggctttaccacatg
gccaaatgcgtgcggcgcgcgaggcacgacatgattgcgtacatgcgctttcgcaagcag
caatcggacgcttcggggcccgagtacattgcgtggtacgagccggaacacgacgtcctc
ggctgggccgccgagcatttcgcgcaacgcatggggcgttcttcgtggatgatcgcgacg
cctcacggcgccgcgttctgggacggctcgcagctgcatatcgaggcgcgccacgcgttg
cgcgatccgcaccattcggatgcaaacgacgaagccgaatccctgtggcttgcgtattac
cgcagtacattcaaccctgcccgcctgaacgaggcggcgctccagcagcacatgccggtg
cggttctggaaaggcctgcccgagggccgtctgattcccgccatgctcagtgaagcgagg
accggcgcgcggcgtgtggcgcaagcgagcggcgtgaccgcactcggcggcaaggccatc
cccgtcgaagcggaatcagcgcagccggcgcgcgctcagccgtcgtcgctgaatgcgtgc
cggcgctgcgttctgtggcggcacgcgacgcaagccgtcggcggcgcagggccgcggccc
gcgcctatcatgctgatcggcgagcagcccggcgaccaggaagacctgagcggcgagccc
ttcgtcggtccggcgggacaactgctgaacagcgccatcgcgcgcgccgggctcacgcgc
gacgagctttatctcaccaacgcggtcaagcatttcaagtgggaaccgcgcggcaagcgg
cggctgcataaaacgcccgcgcagcgtgaagtggaagcctgttctcactggctcgcgcac
gaattcgccacggtccggccatcggtcgtcgtcgtgctcggggccaccgcgctccatgcg
ttgctgcgtgaaagcgcaagcttgagcgactatctcagcgaaccgttcgagctggagggc
ggttggggcatcgccacctatcatccgtcgtttgcactgcgtcagcgggacggcgctgcg
cgcgagaaggtgacggccgacatcaccggggcactgatcaaggcgcgtcaactggcggca
tccctcgaagccggcccgcgcagagcccggtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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