KEGG   Stenotrophomonas maltophilia JV3: BurJV3_1241
Entry
BurJV3_1241       CDS       T01596                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
buj  Stenotrophomonas maltophilia JV3
Pathway
buj03030  DNA replication
buj03430  Mismatch repair
buj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:buj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BurJV3_1241
   03430 Mismatch repair
    BurJV3_1241
   03440 Homologous recombination
    BurJV3_1241
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:buj03032]
    BurJV3_1241
   03400 DNA repair and recombination proteins [BR:buj03400]
    BurJV3_1241
Enzymes [BR:buj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BurJV3_1241
DNA replication proteins [BR:buj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BurJV3_1241
DNA repair and recombination proteins [BR:buj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BurJV3_1241
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon tRNA_anti_2
Other DBs
NCBI-ProteinID: AEM50573
Position
complement(1396910..1400500)
AA seq 1196 aa
MSNSRFVHLHVHTEFSLADSTIRVPAKPDQADPKKAKQANLLSRSVELGLPALAVTDLNN
LFALVKFYKAAEGVGIKPIAGADVLIAEEGQDPWRMTLLCRDREGYLSLSRLLTRAWMEG
HRPEGGVAVHPDWLKAGNANLFALAGRQSLAGRLALDGKHELAEQQLADWQRVFGDGLHL
ELTRTGREGEETFNQFALMAAGQRGLPVVASNDVRFLSPSDFSAHEARVCISTGRVLDDP
KRPREYSDQQYLKSAEEMCALFADIPDAIDNTLALAERCNIEMRLGTYFLPNYPVPDDET
LDTWIQKMSRDGLEERLEKNPLAPGKTREEYFERLEFELNTIIKMGFPGYFLIVADFIQW
GKNQGIPIGPGRGSGAGSLVAWALKITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMDR
RDEVIDYVARKYGRERVSQIITYGTMAAKAVVRDSGRVLGFPYGLVDGVSKLIPNILGIH
LKDALGKGKEGPSSEMASAELIQRYETEDDVRDLIDLALQLEDLTRNAGKHAGGVVIGPE
PLSEFCPLYAEHDENGLGKNPVTQFDKNDVEEVGLVKFDFLGLRTLTIIDWAVKAINKRH
ERAGIPPVDIAAIPLDDTPTYKDIFANGNTGAVFQFESSGMRRLLKDARPDRFEDLIALV
SLYRPGPMDLIPSFNARKHGQEEIIYPDPRTEAILKDTYGIMVYQEQVMQMAQIVGGYSL
GGADLLRRAMGKKVPAEMAKHREIFREGAAKDGVDEAKADAIFDLMEKFAGYGFNKSHAA
AYALVSYQTAWLKRHYPAEFMAATLSSDLDNTDKVVGFLDEVRNLGLTVLPPKVNQSAFM
FEAVTPDTIQYGLGAIKGVGQGACEAVVDERLKGGEYKDLLDFCTRVGSAKLNRRTLEAM
INCGALDELGHNRASLMLQLPEVIKATDQMARERASGQNSLFGGPDPSATTIQLDLPEAE
EWPLLQRLNGERDTLGFYLSGHPFDPWRDDVRDLVGNDLGAVEKIWSANSGGGGGGEKRW
RPEVQTVLAGQVVGVRRKGESQIFIQLEDGRGRVECSAFSDAMAEFGHLMTKDRILVVKG
GLREDEFNGGFALRIRQCWDFDEVCANYATRLSLRLDLRQQRPVWERIDALLDRHRPGRT
PLRLDLLLKGPHGGVAGMLDVSGQSAVRIDSKLMEALRADPAVRTLKVRYSPPWAS
NT seq 3591 nt   +upstreamnt  +downstreamnt
atgtccaactcccgcttcgtacatctccacgtccacaccgagttctcgctggcggactcg
accatccgcgtgccggccaagcccgaccaggcggacccgaagaaggccaagcaggccaac
ctgctgtcgcgctcggtcgaactcggcctgcccgcgctggcggtgaccgacctcaacaac
ctgttcgccctggtcaagttctacaaggcggccgaaggcgtgggcatcaagccgatcgcc
ggcgccgacgtgctgatcgccgaggaaggccaggacccgtggcggatgaccctgctgtgc
cgcgatcgcgagggctacctgagcctgtcgcgcctgctgacccgcgcctggatggaaggg
catcgcccggaaggcggcgtggccgtgcacccggactggctgaaggccggcaacgccaac
ctgttcgcgctggccggccggcagagcctggccgggcgcctggcgctggacggcaagcat
gaactggccgagcagcagctggccgactggcagcgcgtgttcggcgatggcctgcacctg
gagctgacccgcaccggccgcgagggcgaggaaaccttcaaccagttcgcgctgatggcc
gccggccagcgcggcctgccggtggtggccagcaacgacgtgcgcttcctgtcaccgtcg
gacttcagcgcgcacgaagcgcgcgtgtgcatttccaccggccgcgtgctggacgacccc
aagcgcccgcgcgaatacagcgaccagcagtacctgaagtcggccgaggagatgtgcgcg
ctgttcgccgacattcccgatgcgatcgacaacacgctggcgctggccgagcgctgcaac
atcgagatgcggctgggcacctacttcctgcccaactacccggtgccggacgacgaaacc
ctggacacctggatccagaagatgtcgcgcgacggcctggaagagcgcctggagaagaat
ccgctggcgccgggcaagacccgcgaagagtacttcgagcgcctggaattcgagctcaac
accatcatcaagatgggcttcccgggctacttcctgatcgtggccgacttcatccagtgg
ggcaagaaccagggcattccgatcggccccggccgtggttcgggtgctggttcgctggtg
gcgtgggcgctgaagatcaccgatctggatccgctgccgtacaacctgctgttcgagcga
ttcctcaatcccgaacgcgtgtcgatgcccgacttcgacatcgacttctgcatggaccgc
cgcgacgaggtgatcgactacgtcgcacgcaagtacgggcgcgagcgcgtcagccagatc
atcacctacggcaccatggccgccaaggcggtggtgcgcgactccggccgcgtgctcggc
ttcccgtacggcctggtcgacggtgtctccaagctgatcccgaacatcctcggcatccac
ctgaaggatgcgctgggcaagggcaaggaaggcccgagctcggaaatggcctcggccgaa
ctgatccagcgctacgagaccgaggacgatgtccgcgacctgatcgatctggcgctgcag
ctggaagacctgacccgcaacgccggcaagcacgccggtggcgtggtgatcgggcccgag
ccgctgagcgagttctgcccgctgtacgccgaacacgacgagaacggactcggcaagaac
ccggtcacccagttcgacaagaacgacgtggaagaagtgggcctggtgaagttcgacttc
ctgggcctgcgcacgctgaccatcatcgactgggcggtgaaggcgatcaacaagcgccat
gagcgcgccggcatcccgccggtggacatcgccgcgatcccgctggacgacacgcccacc
tacaaggacatcttcgccaacggcaataccggcgcggtgttccagttcgaatcctcgggc
atgcgccgcctgctgaaggatgcgcgccccgaccgcttcgaagacctgatcgcgctggtg
tcgctgtaccgacctggcccgatggacctgattccctccttcaacgcgcgtaagcacggc
caggaagaaatcatctatcccgatccgcgcaccgaagcgatcctgaaggacacctacggc
atcatggtgtaccaggagcaggtgatgcagatggcgcagatcgtcggcggctactcgctg
ggcggcgccgacctgctgcgccgcgcgatgggcaagaaggtgccggcggaaatggccaag
caccgcgagatcttccgcgaaggcgcggccaaggacggcgtggacgaggccaaggccgat
gcgatcttcgacctgatggagaagttcgccggttacggcttcaacaagtcccacgccgct
gcctacgcgctggtcagctaccagaccgcctggctgaagcgccactacccggccgagttc
atggccgccacgctgtcttccgacctcgacaacaccgacaaggtggtcggcttcctcgac
gaggtgcgcaacctcggcctgaccgtgctgccgccgaaggtgaaccagtccgccttcatg
ttcgaggcggtgacgcctgacaccatccagtacggcctgggcgcgatcaagggcgtcggc
cagggtgcctgcgaagcggtggtcgacgaacgcctgaagggcggcgagtacaaggacctg
ctcgacttctgcacccgcgtcggttcggccaagctcaaccggcgcacgctggaagcgatg
atcaactgcggcgcactggatgagctcggccacaaccgcgcctcgctgatgctgcagctg
cctgaggtgatcaaggccaccgaccagatggcgcgcgaacgtgcgtcgggccagaactcg
ctgttcggcggccccgacccgagcgcgaccacgatccagctggacctgcccgaagccgag
gaatggccgctgttgcagcgcctcaatggcgagcgcgacacgctgggcttctacctcagc
ggccacccgttcgacccctggcgcgacgacgtgcgcgacctggtcggcaacgacctgggc
gcggtggagaagatctggagcgccaacagcggtggcggtggtggcggcgaaaagcgctgg
cgcccggaagtgcagaccgtgctggccggccaggtggtcggcgtgcgccgcaagggtgag
agccagatcttcatccagctcgaggacggccgtggccgcgtcgagtgcagcgcgttctcc
gacgcgatggccgaattcggccacctgatgaccaaggaccgcatcctggtggtcaagggt
ggcctgcgcgaggacgaattcaacggcggcttcgcgctgcgcatccgccagtgctgggac
ttcgacgaagtctgcgccaactacgccacgcggctgtcgctgcgcctggacctgcgccag
cagcgcccggtctgggagcgcattgacgccctgctcgaccgccatcgccccgggcgaacg
ccgctgcgcctggacctgctgctgaaggggccgcacggtggcgtcgccggcatgctcgat
gtgtccgggcagagcgcggtgcgcatcgattccaagctgatggaggcgctgcgcgccgac
ccggccgtgcgcacgttgaaggtgcgctacagcccgccctgggccagctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system