KEGG   Stenotrophomonas maltophilia JV3: BurJV3_1283
Entry
BurJV3_1283       CDS       T01596                                 
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
buj  Stenotrophomonas maltophilia JV3
Pathway
buj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:buj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BurJV3_1283
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:buj03019]
    BurJV3_1283
   03016 Transfer RNA biogenesis [BR:buj03016]
    BurJV3_1283
Enzymes [BR:buj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     BurJV3_1283
Messenger RNA biogenesis [BR:buj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BurJV3_1283
Transfer RNA biogenesis [BR:buj03016]
 Prokaryotic type
  tRNA degradation factors
   BurJV3_1283
SSDB
Motif
Pfam: RNB CSD2 OB_RNB S1 RNase_II_C_S1 HTH_20 OB_Dis3
Other DBs
NCBI-ProteinID: AEM50615
Position
1448834..1451293
AA seq 819 aa
MTTKKPSKGGSKSRSQAPNKGAKSGAARTPKPGKPLPGWFPELNDGGAPPRGRKARSTDA
PGPAPGRKLPPTGKVIDDPYAAREAEKYEQPIASREAILALLERCEGPQTAEELGARLGL
TAPDRAEALSRRLGAMVRDGQLVQNRRGGFAPIQTLNLVTGVVIANPEGFGFLRPVEGGD
DLFLPPYEMRKVMHGDKVLARVTGIDHRGRREGSIARVLERGMTRLIGRFSIEMGINYVV
PDDKRVQRNVQVPPDQTGGARDGQLVVCELTQAPDSRRPPIGRIIAVLGDKLTASLVVET
AIHGHELPFEFPQEVLDEAASVPLVVEPAMIGDRVDLRSTPLVTIDGEDAKDFDDAVYCE
PNAEGFRLVVAIADVSNYVRPGTPLDEEAQKRATSVYFPGFVVPMLPETLSNGICSLMPK
VDRMCFVCDMQIDRDGLVTHSRFYEAVMNSHARLTYTQVWKAVGEDDADTKAWMGDLLPQ
VQRLHQLYKVLSKARAKRGAIEFESSEVRFVLDNRGEVTQAGMLVRNDAHKLIEECMIAA
NVEAARYLLSRHVPAPYRIHEKPPETKYADLLEFLKEFKLSLPPWSKVRPGDYTKLLKKI
RDRPDATLLESVLLRSQSLAIYSPENHGHFGLALEAYAHFTSPIRRYPDLLVHRAIKHAL
SGKPLDKFTYNAREMAALALQCSERERRADEAEREVDERYRAAWMEKHVGGQFDGVISGV
TSFGLFVELDESKVQGLVHVTQLPQDYYKFDATRKTLTGERRGSSYRLGDRVRILVLKAS
MEERKIDFRLVEHKGEDEGDGLPPLPERGKPAKRTKKQY
NT seq 2460 nt   +upstreamnt  +downstreamnt
atgactaccaaaaaaccaagcaagggcgggagcaagtcccgcagccaggccccgaacaag
ggcgccaagtcgggcgcagcccgcacccccaagccgggcaagccgttgccgggctggttc
cccgaattgaatgacggcggtgcaccgccgcgaggccgcaaggcccgcagtaccgacgcc
ccgggcccggcaccgggccgcaagctgccgccgaccggcaaggtgatcgacgatccctat
gccgcccgcgaagccgagaaatacgaacagcccatcgccagccgcgaggccatcctggcc
ctgctggagcgctgcgaagggccgcagaccgccgaagaactgggcgcgcgcctgggcctg
accgcgccggaccgggccgaagcgctgtcgcgccggctcggcgccatggtccgtgatggc
cagctggtgcagaaccgccggggcggtttcgccccgatccagaccttgaacctggtcact
ggcgtggtgatcgccaacccggaagggttcggcttcctgcgcccggtcgaaggcggcgat
gacctgttcctgccgccgtatgagatgcgcaaggtgatgcacggcgacaaggtgctggcc
cgtgtgaccggcatcgatcaccgtggccgtcgcgaaggcagcatcgcccgcgtgctcgaa
cgcggcatgacccgcctgatcggccgcttcagcatcgagatgggcatcaactatgtggtg
cccgacgacaagcgggtgcagcgcaacgtgcaggtgccgccggaccagaccggtggtgca
cgcgacggccagctggtggtctgcgaactgacccaggcgccggacagccgccgtccgccg
atcggccgcatcatcgccgtgctcggcgacaagctgaccgcgtcgctggtggtggagacc
gccatccacggccacgagctgccgttcgagttcccgcaggaggtgctggacgaagcggcc
tcggtgccgctggtggtcgagcccgcaatgatcggcgaccgcgtcgacctgcgcagcacg
ccgctggtcaccatcgacggtgaggatgccaaggacttcgacgacgcggtgtactgcgag
ccgaatgccgagggtttccgcctggtggtggcgatcgccgatgtctcgaactacgtgcgc
cccggcacgccgctggatgaggaggcgcagaagcgcgccacctcggtgtacttcccgggc
ttcgtggtaccgatgctgccggagacgctgtccaacggcatctgctcgctgatgccgaag
gtcgatcgcatgtgctttgtctgcgacatgcagatcgaccgcgatggcctggtcacgcat
tcgcgcttctacgaggcggtgatgaactcgcatgcgcgcctgacctacacccaggtgtgg
aaggcggtgggcgaggacgatgccgataccaaggcctggatgggcgacctgctgccgcag
gtgcagcgcctgcaccagctgtacaaggtgctgtccaaggcacgtgccaagcgcggtgcc
atcgagttcgaaagcagtgaagtgcgcttcgtgctggacaaccgcggtgaagtgacccag
gccggcatgctggtgcgcaacgacgcccacaagctgatcgaggagtgcatgatcgcggcc
aacgtcgaggcggccaggtacctgctgtcgcgccatgtgccggcgccgtaccgcatccac
gagaagccgccggaaaccaagtacgccgacctgctggaattcctcaaggagttcaagctg
agcctgccgccgtggtcgaaggtgcgcccgggtgactacaccaagctgctgaagaagatc
cgcgaccgccccgatgccacgctgctggaatcggtgctgctgcgcagccagagcctggcg
atctacagcccggagaatcacggccacttcggcctggcgctggaggcgtacgcgcacttc
acctcgccgatccgccgttaccccgacctgctggtgcaccgtgcgatcaagcatgcgttg
tccggcaagccgctggacaagttcacctacaacgcgcgcgaaatggcagccctggcgctg
cagtgttccgagcgtgagcgtcgtgccgacgaggccgagcgcgaagtcgacgagcgttac
cgcgcggcgtggatggaaaagcacgtgggcggccagttcgacggcgtgatcagcggcgtg
accagcttcggcctgttcgtggaactggacgagtccaaggtgcagggcctggtgcatgtg
acccagctgccgcaggactattacaagttcgacgccacccgcaagacgctgaccggcgaa
cgccgtggcagcagctatcggttgggcgaccgcgtgcgcatcctggtgctgaaggccagc
atggaagagcgcaagatcgacttccgcctggtcgagcacaagggcgaagacgagggcgat
ggcctgccgccgctgcccgagcgtggcaagccggccaagcgcaccaagaagcaatattga

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