KEGG   Burkholderia sp. 2002721687: BW21_4224
Entry
BW21_4224         CDS       T03759                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
bul  Burkholderia sp. 2002721687
Pathway
bul03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bul00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BW21_4224 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bul03400]
    BW21_4224 (uvrA)
DNA repair and recombination proteins [BR:bul03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BW21_4224 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BW21_4224 (uvrA)
SSDB
Motif
Pfam: UvrA_inter ABC_tran AAA_21 AAA_29 SMC_N AAA_16 nSTAND1 AAA_22 NACHT AAA_18 UvrA_DNA-bind Viral_helicase1 RsgA_GTPase AAA_33 AAA_25 nSTAND3 ATPase DnaJ_CXXCXGXG DUF4350 Anti-TRAP
Other DBs
NCBI-ProteinID: AJY39376
Position
II:complement(728769..734585)
AA seq 1938 aa
MTVVTGPSGSGKSSLVFDTLYAEGQRRYVETFSAYARQFLDRMDRPQVDRVEGVPPAIAI
DQTNPVRSSRSTVGTMTELNDHLKLLYARAAELFDRKTARPVRHDTPETIYADLFARTAD
HDPRLVVTFAVELPETASDEEVEQWLSASGYTRVQARREIASPTGPRKVLDVVADRFRLR
QVDKARAIEAIEASLKRGGGRVSVYVLAQVPENANDTAAQSQVWRYSTGLHDPDSDLRYA
DPQAALFSFNSAYGACETCRGFGRVIGVDLGLVIPDARKTLRGGAIKPMQTPAWKECQDD
LMRHAAKAGIRRDTPWAELSDEERDWVVNGSPDWNGKWQSQWYGVKRFFGYLESKAYKMH
IRVLLSKYRSYTPCEVCGGARLKTEALLWRLGTKANADAVLASADRFMPRGVDWTRAQLE
ALPGLTVHDLMLLPIERIRRFFDDISLPSALLDDALKLLLAEVRTRLKYLCDVGLGYLTL
DRQSRTLSGGEVQRINLTTALGTSLTKTLFVLDEPSIGLHPRDLNRIVEAMQRLRDAGNT
LVVVEHDPSVMLAADRLIDMGPGPGERGGTIVYDGTPGDIRSAQTLTGEYLGGRKHVAHA
SHWSRRPVDAHTPRIVLEGASEHNLRDVTVEIPLRRLVCVTGVSGSGKSTLLQDVLYPAM
ARHFGKATESPGAYRRLAGAEQVSDVVFVDQSPIGKTTRSNPASYVGAFDEIRKLFAKAP
LALQRGYGAGTFSFNSGDGRCPTCGGSGFEHIEMQFLSDVYLRCPDCDGRRYRAEILEVR
IERGGRALSVADVLDLTVSEAAACFAADAEVLRVLQPIVDVGLEYVKLGQPVPTLSGGEA
QRLKLAGFLAESAKTGGVRRTDARQARTARLFMFDEPTTGLHFDDIAKLMQAFGKLLAAG
HSLIVIEHNLDVIRAADWLIDLGPEGGDGGGLVLCAGTPDEVKACAGSHTGAALLHYDRA
MGAEAESADQGIPLQTALNAARARRSVEGEDVVRIVNAREHNLKALDVDIPHGKFNVVTG
VSGSGKSTLAFDILFHEGQRRYLESLNAYARSIVQPAGRPEVDAVYGIPPTVAIEQRLSR
GGRKSTVATTSEVWHFLRLLYVKLGLQHCIHDGTPVTSQTVESIAAQLLRDHRGEHVGLL
APLVVNRKGVYTDLAKWAKARGNTHLRVDGEFVTVVPWPKLDRFREHTIELPVADLVVSP
DNEAELRQRLNEALELGKGVMHLLAPLDGLHHAMANRLSTARVGAVKVLSVKRACPVCGT
SYPELDPRMFSYNSKHGWCTACVGTGLALTREQRAAYDDTVLAEDGRGREQTLPSDEQEP
EGVGDAPCPDCGGTRLNPSARGVTFDGHSIVDVAQWTVSDTRRWIDGLRLAGRDAQIARD
IVGEIGSRLAFLEEVGLGYLSLDRAAPSLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIG
LHPRDNQILLNALRKLGDKGNTLVVVEHDEDTIRRADHIIDIGPGAGKRGGTLVAQGGVA
DLSAQSESVTGRLLAQPMTHPLQTRRGVNPPGKKNGPAVPQTWLTVHGARLHNLRDVTVG
IPLARLVAVTGVSGSGKSTLARDVLMTNLLDAVGRSVLSSPATRRARKAAQQEAPQAGNR
RTSVLARSAPRPSLNVTHAWQGCESISGWEHIDRVLEVDQTPIGKTPRSCPATYIGVWDT
IRKLFADTLEARARGYTASRFSFNTGEGRCPACEGQGVRTIGMSFLPDVKVPCDVCHGQR
FNPETLAVTWRGRNIGDVLTMEIDEAVEFFAPISNIAHPLQLMKDVGLGYLTLGQPSPTL
SGGEAQRIKLVTELSKVRDDITRRGQKAPHTLYVLDEPTVGLHMADVAKLIRVLHRLVDA
GHSVVVIEHDLDVIAEADWIIDLGPEGGAGGGAIVAAAHPEGLAQVSASHTGRALEPVLA
RTGADRGEPVRSGEAGVG
NT seq 5817 nt   +upstreamnt  +downstreamnt
atgacggtcgtcaccggcccgtcgggctccggcaagtcgagtctcgtgttcgacaccctg
tacgcggagggccagcggcgctacgtcgagacgttcagcgcgtatgcgcggcagtttctc
gaccggatggaccggccgcaggtggaccgcgtcgaaggcgtgccgcccgcgatcgcgatc
gaccagaccaatccggtccgcagttcgcgctcgaccgtcggcacgatgaccgagctcaac
gatcacctgaagctcctgtacgcgcgcgcggcggaactgttcgaccgcaagaccgcgcgg
ccggtgcggcacgacacgcctgagacgatctatgcggacctcttcgcgcgcacggcggat
cacgatccgcggctcgtggtcacgttcgccgtcgagttgccggaaaccgcgagcgacgag
gaagtcgagcagtggctgtcggcgagcggctatacgcgggtgcaggcgcggcgcgaaatc
gcgtcgcccaccgggccgcgcaaggtgctcgacgtggtggccgaccgcttccgtctgcgt
caggtcgacaaggcgcgcgcgatcgaggcgatcgaagcgtcgttgaagcgcggcggcggg
cgggtgagcgtctacgtgctcgcgcaggtgccggagaacgcgaacgacacggccgcacag
tctcaggtatggcgatactccaccgggctccatgaccccgacagcgatctgcgctacgcg
gatccgcaggcggcgctgttctccttcaactcggcgtacggcgcgtgcgaaacctgccgc
ggctttggccgcgtgatcggcgtcgatctcggcctcgtgattcccgacgcgcgcaagacg
ctgcgcggcggcgcgatcaagccgatgcagacgcccgcctggaaggaatgccaggacgac
ctgatgcgccatgcggcgaaggcgggcattcggcgcgatacgccgtgggccgagctgtcg
gacgaagagcgggactgggtcgtcaacggctcgccggactggaacggcaagtggcagagc
cagtggtacggcgtgaagcgcttcttcggctacctcgaatcgaaagcgtacaagatgcat
atccgcgtgctgctgtcgaaataccgcagctacacgccttgcgaggtgtgcggcggcgcg
cgcctgaagacggaagcgctgctgtggcggctcggcacgaaggcgaacgccgacgcggtg
ctcgcgagcgccgatcgcttcatgccgcgcggcgtcgactggacccgcgcgcagctcgaa
gcgctgccgggcctgacggtgcacgacctgatgctgctgccgatcgagcgcattcgccgc
ttcttcgacgacatcagcctgccgagcgcgctgctcgacgatgcgctgaagctgctgctc
gccgaggtgcgcacgcggctgaagtatctgtgcgacgtggggctcggctatctgacgctc
gaccggcagagccgcacgctgtcgggcggcgaggtgcagcggatcaacctgacgacggcg
ctcggcacgtcgctcacgaagacgctcttcgtgctcgacgagccgagcatcgggctgcat
ccgcgcgacctgaaccggatcgtcgaggcgatgcagcgcctgcgcgacgcgggcaatacg
ctcgtcgtcgtcgaacacgatccgtcggtgatgctcgcggccgaccggctgatcgacatg
ggccccggcccgggtgagcgcggcggcacgatcgtctacgacggcacgcccggcgacatc
cgctcggcccagacgctgacgggcgagtatctcggcggccgcaagcacgtcgcgcacgcg
tcgcactggtcgcgccggcccgtggacgcgcacacgccgcgcatcgtgctcgagggcgcg
agcgagcataatctgcgcgacgtgacggtcgagattccgttgcggcggctcgtttgcgtg
accggcgtgtcgggttccggcaaatctacgctgttgcaggacgtgctctatccggcgatg
gcgcggcacttcggcaaggccaccgagtcgccgggcgcgtaccgccgcctcgcgggcgcg
gagcaggtgagcgatgtcgtgttcgtcgaccagtcgccgatcggcaagaccacgcgctcg
aatccggcgagctatgtcggcgcgttcgacgagatccgcaagctgttcgcgaaggcgccg
ctcgcgctgcaacgcggctacggcgcgggcacgttcagcttcaactcgggcgacggccgc
tgcccgacgtgcggcggctccggcttcgagcacatcgagatgcagttcctgagcgacgtc
tacctgcgctgcccggactgcgacggccggcgctaccgagccgagattctcgaagttcgg
atcgagcgcggcggccgcgcgctcagcgttgccgacgtgctcgatctgaccgtcagcgag
gccgcggcgtgcttcgccgccgacgccgaggtgttgcgcgtgctgcagccgatcgtcgac
gtcgggctcgaatacgtgaagctcggccagccggtgccgacgctgtcgggtggcgaagcg
cagcgcctgaaactggcgggctttctcgccgaatccgcgaaaaccggcggcgtgcgccgg
accgacgcgagacaggcgcgcaccgcgcgtcttttcatgttcgacgagccgaccacgggg
ctgcacttcgacgacatcgcgaagctgatgcaggcgttcggcaagctgctcgcggcaggc
cattcgctgatcgtgatcgagcacaatctcgacgtgatccgcgcggccgactggctgatc
gacctcggccctgaaggcggcgacggcggcggcctcgtgctgtgcgcgggcacgcccgac
gaagtgaaagcctgcgccggctcgcataccggcgcggcgctgttgcactacgaccgcgca
atgggcgccgaagccgagtccgccgaccagggcataccgttgcagactgcgctgaacgcg
gcgcgtgcgcggcgctcggtcgaaggcgaggacgtcgtgcggatcgtcaacgcgcgcgag
cacaacctgaaggcgctcgacgtcgacattccgcacggcaagttcaacgtggtgactggc
gtgtccggctccggcaagtcgacgctcgcattcgacatcctctttcacgaaggccagcgc
cgctacctcgaatcgctgaacgcgtacgcgcgctcgatcgtgcagccggcggggcgaccg
gaagtcgatgcggtgtacggcattccgccgacggtggcgatcgagcagcggctgtcgcgc
ggcggccgcaagagcacggtcgcgacgacgtccgaagtgtggcacttcctgcggctgctg
tacgtgaagctcggccttcagcattgcatccatgacggcacgccggtgacgtcgcaaacc
gtcgaatcgatcgccgcgcaattgctgcgcgatcaccgcggcgagcacgtcgggctgctc
gcgccgctcgtcgtcaaccgcaagggcgtgtacacggatctcgcgaagtgggcgaaggcg
cgcggcaacacgcatctgcgcgtcgacggcgaattcgtgacggtggtcccgtggccgaag
ctcgaccgcttccgcgagcatacgatcgagctgccggtggccgacctcgtcgtgtcgccg
gacaacgaggccgagctgagacagcgtctgaacgaggcgctcgagctcggcaagggcgtg
atgcatctgctcgcgccgctcgacggcctgcatcacgcgatggccaaccgtctttccacc
gctcgcgtcggcgcggtcaaggtgctgtcggtgaagcgcgcgtgcccggtgtgcggcacg
agctacccggagctggacccgcggatgttctcgtacaacagcaagcatggctggtgcacg
gcctgcgtgggcaccggcctcgcgctcacgcgcgagcagcgcgcggcgtacgacgacacg
gtgcttgccgaagacggccgcggccgcgagcagacgctgccctccgacgagcaggaaccg
gagggcgtcggcgacgcgccgtgcccggattgcggcggcacgcgtctgaatccgtccgcg
cgcggggtgaccttcgacggccattcgatcgtcgacgtcgcgcaatggaccgtatcggat
acgcgccgctggatcgacggcctgcggctcgcggggcgggacgcgcagatcgcgcgcgac
atcgtcggcgaaatcggcagccgcctcgcgtttctcgaggaagtcgggctcggctacctg
agcctcgatcgcgcggcgccgagcctgtcgggcggcgaagcgcaacgcatccggcttgcg
gcgcaactgggcagcaacctgcagggtgtctgctacgtgctcgacgagccgacgatcggc
ctgcatccgcgcgataaccagatcctgctgaacgcgctgcgcaagctcggcgacaagggc
aatacgctcgtcgtcgtcgagcacgacgaagacacgattcgccgcgccgatcacatcatc
gacatcggcccgggcgccggcaagcgcggcggcacgctggtcgcgcagggcggggtggcg
gatctgtccgcgcagtccgagtcggtgacggggcgcctgctcgcccaaccgatgacgcat
ccgctgcagacgcgccgcggcgtgaatccgcctggcaagaagaacgggccggcggtgccg
cagacctggctgacggtgcacggcgcaaggctgcataacctgcgcgacgtcacggtcggc
attccgctcgcgcggctcgtcgcggtgacgggcgtgagcggctcgggcaaatcgacgctc
gcgcgcgatgtgctgatgaccaacctgctcgacgcggtgggccgctcggtgctgtcgtcg
cccgcgacgcggcgcgcgcgcaaggccgcgcagcaggaagcgccgcaggcggggaatcgc
cgcacgagcgtgctggcgcgcagcgcgccacggccgtcgctgaacgtcacgcatgcgtgg
cagggctgcgaatcgatcagcggctgggagcatatcgaccgcgtgctcgaagtcgatcag
acgccgatcggcaagacgccgcgctcatgcccggcgacctacatcggcgtgtgggacacg
atccgcaagctgttcgcggacacgctggaggcccgtgcgcgcggctacacggcgtcgcgt
ttctcgttcaacaccggcgaagggcgttgccctgcgtgcgaagggcaaggcgtgcgcacg
atcggcatgagcttcctgcccgacgtgaaggtgccgtgcgacgtgtgccacgggcaacgc
ttcaacccggagacgctcgcggtgacgtggcgcggccggaacatcggcgacgtgctgacg
atggagatcgacgaagcggtggagttcttcgcgccgatctcgaacatcgcgcacccgctg
caactgatgaaggacgtcggcctcggctatctgacgctcggccagccgtcgccgaccttg
tccggcggcgaggcgcagcgcatcaagctcgtcaccgagctcagcaaggtgcgcgacgac
atcacgcggcgcggccagaaagcgccgcacacgctatacgtgctcgacgaaccgaccgtg
ggcctgcacatggcggatgtcgcgaagctgatccgcgtgctgcaccggctcgtggacgcg
gggcacagtgtcgtcgtgatcgagcacgacctcgacgtgatcgctgaagcggactggatc
atcgacctcggcccggagggcggcgcgggcggcggcgcgatcgtggcggccgcgcatccg
gaagggctcgcgcaggtgagcgcgagccatacggggcgcgcgctcgaaccggtgctggcg
cgaacgggcgcggaccggggcgagcctgtgcgaagcggtgaggcgggagtcggttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (27)   

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