KEGG   Bacteroides uniformis: Bun01g_06570
Entry
Bun01g_06570      CDS       T06523                                 
Symbol
rnr
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
bun  Bacteroides uniformis
Pathway
bun03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bun00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Bun01g_06570 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bun03019]
    Bun01g_06570 (rnr)
   03016 Transfer RNA biogenesis [BR:bun03016]
    Bun01g_06570 (rnr)
Enzymes [BR:bun01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     Bun01g_06570 (rnr)
Messenger RNA biogenesis [BR:bun03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Bun01g_06570 (rnr)
Transfer RNA biogenesis [BR:bun03016]
 Prokaryotic type
  tRNA degradation factors
   Bun01g_06570 (rnr)
SSDB
Motif
Pfam: RNB CSD2 OB_RNB OB_Dis3 S1 SAP_new25
Other DBs
NCBI-ProteinID: BBK86287
UniProt: A0A139K524
Position
911452..913596
AA seq 714 aa
MAKKKEKKAGKRMKKKELVKVLLEFFHTKQDEVLSLKYIFEQLHLTTHPLKMLCMDILSE
LSMDDYITEVDKHKYKLNNHGVEMTGTFQRKSNGKNSFIPEGGGEPIFVAERNSAHAMNN
DKVRIAFYAKRRGREAEGEVIEILERANDTFVGTLEVAKSYAFLVTENRTLANDIFIPKE
KLKGGKTGDKAIVKVVEWPDKAKNPIGQVIDILGRAGDNTTEMHAILAEFGLPYVYPAAV
EKAADKIPAEISAEEIARREDFRGVTTFTIDPKDAKDFDDALSIRKLKGGLWEVGVHIAD
VTHYVKEGGIIDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSVIFEMTE
KGEVKNSRVVHTVIKSDRRFTYEEAQEIIETGKGDFQEEVLQLDKLAKILRENRFKAGAI
NFDRYEVKFEIDEKGKPVSVYFKESKDANKLIEEFMLLANRTVAEKIGRVPKGKKAKVLP
YRIHDLPDPEKLDNLAQFIARFGYKLRTSGTKTDISKSINHLLDDIQGKKEENLIETVSI
RAMQKARYSVHNVGHYGLAFDYYTHFTSPIRRYPDMMVHRLLTKYLDQGGRTVSEQKYEA
LCEHSSSMEQIASNAERASIKYKQVEFMTERLGQTFDGVISGVTEWGLYVELNENKCEGM
IPIRDLDDDYYEFDEKNYCLRGRRKNKIYSLGDAITIKVARANLEKKQLDFALV
NT seq 2145 nt   +upstreamnt  +downstreamnt
atggccaaaaagaaagaaaagaaagccggcaaacgcatgaagaagaaagagctcgtcaaa
gtactgctggaattcttccacacaaagcaagacgaagtattatccctgaaatacatcttt
gaacaactccacctcaccacacatccgctgaagatgctgtgcatggacatcttgtccgaa
ctgtcgatggacgactacatcacagaagtggacaagcacaaatacaagctgaacaaccac
ggcgtggaaatgaccggaaccttccagcgcaagagcaacggcaagaattcctttataccg
gaaggtggaggcgaaccgatattcgtggccgaacgcaactcggcacacgccatgaacaat
gataaagtgcgtatcgccttctatgccaagcgtcgcggacgcgaagccgaaggagaagtc
atcgagatactggaacgtgccaacgacaccttcgtgggtaccctggaagttgccaagtca
tacgctttccttgtaacggaaaaccgtacgcttgccaacgacatcttcatccccaaagaa
aagttgaaaggcggcaagacgggcgacaaagccatcgtaaaggtggtggaatggcccgac
aaagccaagaaccccatcggccaggtaatcgacatcctggggcgcgcaggagacaatacc
accgagatgcacgccatcctggcggaattcggcctgccctatgtctaccccgctgccgta
gagaaagctgccgacaagatacccgccgaaatctccgccgaggaaatagcccgacgtgag
gacttccggggtgtgaccaccttcaccatcgaccccaaggatgccaaggacttcgacgac
gccctctccatccgcaaactgaaagggggactttgggaagtaggcgtacacattgccgac
gtgacccactacgtgaaagagggcggcatcatagacaaggaagccgagaagcgtgccaca
tccgtctacctcgtagaccgcaccatcccaatgctccccgaacggttgtgtaatttcatc
tgttcactccgccccgacgaagagaagcttgcctactccgtcatctttgaaatgacggaa
aaaggcgaagtgaagaactcacgcgtggtacataccgtcatcaagagcgaccgccgcttc
acctacgaagaagcccaggagattatagaaaccggcaaaggagacttccaggaagaggtg
ctccaactggataagcttgccaaaatactgcgtgagaaccgctttaaggcaggagccatc
aacttcgaccgctacgaagtgaagttcgaaattgacgagaagggcaaacccgtcagcgtc
tacttcaaggagtcgaaagatgccaacaagctgatagaggagttcatgctgcttgccaac
cgcaccgtagccgaaaagataggccgcgtgcccaaaggcaagaaagccaaagtgttgcca
taccgtattcacgacctccccgacccggagaagctggacaacctggcacagtttatcgcc
cgtttcggctacaagctgcgtaccagcggtacaaagaccgacatctccaagtccatcaac
cacctgctggacgacatccagggcaagaaggaggagaacttgattgaaaccgtctccatc
cgcgccatgcagaaggcacgctactccgtgcataacgtggggcactatggtttggctttc
gattactatacccatttcacctcgcccatccgccgctatccggatatgatggtacaccgt
ctgctcaccaagtacttggaccagggaggccgcaccgtgtccgaacagaaatacgaagcc
ctctgcgaacacagcagcagcatggagcagatagcctccaacgcggaacgcgcctccatc
aagtacaagcaagtagaattcatgaccgaacgcctgggacagaccttcgacggcgtcatc
tccggcgtaacggaatggggactctacgtggagctgaatgagaacaagtgcgaaggcatg
attcccatccgcgacctcgacgatgactattacgaattcgatgaaaagaactactgcctg
cgcggacgccgcaaaaataaaatttatagtctgggagatgccattaccattaaggtggca
cgcgctaacttggaaaagaagcagctggactttgcactggtgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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