KEGG   Burkholderia sp. HB1: AC233_09300
Entry
AC233_09300       CDS       T04094                                 
Name
(GenBank) nucleoprotein, Hfg, host factor I
  KO
K03666  host factor-I protein
Organism
buq  Burkholderia sp. HB1
Pathway
buq02024  Quorum sensing
buq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:buq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AC233_09300
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AC233_09300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:buq03019]
    AC233_09300
   03036 Chromosome and associated proteins [BR:buq03036]
    AC233_09300
Messenger RNA biogenesis [BR:buq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     AC233_09300
Chromosome and associated proteins [BR:buq03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    AC233_09300
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: ALE54891
Position
1:2161946..2162440
AA seq 164 aa
MASAESHPQNDFMNAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKRA
ISTIQLDTGTRPAPRAGRPSHGEHTTRGPHGSREPREHREPREPRESYGAPSDRPASERG
SSSDTPVVVTRRRRLFGTGGDGGNHGNHGSGGSNGNGNGNGGHE
NT seq 495 nt   +upstreamnt  +downstreamnt
atggcttccgcagaatcgcatccgcaaaacgacttcatgaacgccgcgcgcaaagaacga
aagcgcgttgagatttaccttgtcaacggcatccgcctgacagggtgcatcgagtcgttc
gaccaatatctggtgatgctgcgcacgcccgtcggcctgcagggcatctacaagcgcgcc
atctcgacgatccagctcgataccggaacccgtccggctccgcgcgcgggccgcccgtcg
catggcgagcacaccacccgcgggccgcacggctcgcgtgagccgcgcgagcatcgggaa
ccgcgtgaaccgcgcgaatcgtacggcgcaccgtctgaccggcccgcatcggagcgcggc
agttcgtccgatacgccggtggtcgtcacgcgccggcgccgtctgttcggcacgggcggc
gacggcggcaaccacggcaatcacggcagtggcggcagcaacggtaatggcaacggcaac
ggcggccacgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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