KEGG T04094: AC233

Burkholderia sp. HB1: AC233_13020

Entry

AC233_13020       CDS       T04094

Name

(GenBank) ribonuclease III

K03685

ribonuclease III [EC:3.1.26.3]

Organism

buq Burkholderia sp. HB1

Brite

KEGG Orthology (KO) [BR:buq00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:buq03019]
    AC233_13020
   03009 Ribosome biogenesis [BR:buq03009]
    AC233_13020
   03036 Chromosome and associated proteins [BR:buq03036]
    AC233_13020
Enzymes [BR:buq01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     AC233_13020
Messenger RNA biogenesis [BR:buq03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AC233_13020
Ribosome biogenesis [BR:buq03009]
Eukaryotic type
  90S particles
   RNase
    AC233_13020
Prokaryotic type
  rRNA processing factors
   AC233_13020
Chromosome and associated proteins [BR:buq03036]
Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     AC233_13020

SSDB

Motif

Pfam:

Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM

Other DBs

NCBI-ProteinID:

ALE56675

Position

1:complement(3018911..3020149)

AA seq 412 aa
MRYEFRNAELLRQALTHRSHSSTHNERLEFLGDSVLNCAVAALLFQRFGKLDEGDLSRVR
ANLVKQQSLYEIAQALNISEGLRLGEGELRSGGFRRPSILADTLEAVLGAVFLDGGFDAA
QTVIKRLYVPILDHIDPRTLGKDAKTLLQEYLQGHKIALPTYTVVATHGAAHNQQFEVEC
TVPKLDVKVSGSGASRRAAEQAAAKKALDEVMAAAPAVVSKSKRSKGARAAKKAEAEIVP
GVTGVQAALDLRSPDRKNERAAARGEMRTAPAAEPIPERTAIAVAAVAAPLAVIRAAHVE
YSAPEKLERADRVERGEKADKADKLDKPAAEPKMAEAKPAEARPTDPKPAEPAARTTDKP
HRTRDAAASAAASAATNAAASSASPATNAAAPTEHEPGVADAVQTRVADAGH

NT seq 1239 nt +upstreamnt +downstreamnt
ctgcgctatgaatttcgcaatgcggaattgttgcgccaggctttaacgcaccgcagtcac
agttccacgcataacgaacggctcgaatttcttggcgactccgttctgaactgcgcggtg
gctgcgcttttgttccaacgtttcggcaagctagacgaaggcgatttgtcgcgcgtccgt
gcaaatctggtcaagcagcaatcgctgtacgaaatcgctcaggccctgaatatttccgaa
ggtcttcgcctcggcgagggcgaactgcgcagcggcggcttccgtcggccgtcgattctc
gccgatacgctcgaagccgtgctgggcgcggtgttcctcgacggcggctttgacgccgcg
cagacggtcatcaaacgtctttacgtgccgattctcgatcatatcgacccgcgcacgctc
ggcaaggacgccaagacgctccttcaggaatatctgcagggacacaagattgcgttgccg
acgtacaccgtcgtcgccacgcatggtgcggcgcacaaccagcagttcgaagtcgaatgc
accgtgccgaagctggacgtgaaggtgtccggctcgggcgcgagccgccgcgcggcagag
caagccgcggcgaagaaggcgctcgacgaagtcatggccgcggcgccggctgtcgtctcc
aagtcgaagcggtcgaagggcgcgcgcgcggcgaaaaaggccgaggctgagattgtgccg
ggcgtgactggcgtgcaggcagcgctggatttgcgcagtcccgaccgcaagaacgaacgc
gcggcagcgcgcggcgaaatgcggacggcgccggccgctgaaccgataccggaacgcacg
gcgatcgcggtggcggccgtcgctgcgccgctcgcggtgattcgcgccgcgcatgtcgag
tacagcgcgccggagaagctggagcgcgcggacagggtcgaaaggggcgaaaaggcggat
aaagccgacaagctagacaagcccgccgccgaaccgaagatggccgaagcgaagcccgcc
gaagccaggcccaccgacccaaaacccgccgaacccgccgcccgcacaaccgacaagccg
caccgcactcgcgacgccgcggctagtgcggcggccagtgcagcgaccaatgcggcggcc
agctccgcatcgcccgcaacgaacgcggcggcgcccaccgaacacgaacccggcgtagcc
gacgcggtacaaacgcgcgtcgccgacgcgggccattga

All links

Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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