KEGG   Burkholderia sp. HB1: AC233_13330
Entry
AC233_13330       CDS       T04094                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
buq  Burkholderia sp. HB1
Brite
KEGG Orthology (KO) [BR:buq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:buq03019]
    AC233_13330
   03009 Ribosome biogenesis [BR:buq03009]
    AC233_13330
Messenger RNA biogenesis [BR:buq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AC233_13330
Ribosome biogenesis [BR:buq03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    AC233_13330
SSDB
Motif
Pfam: RNase_T RNase_H_2
Other DBs
NCBI-ProteinID: ALE55542
Position
1:complement(3084562..3085173)
AA seq 203 aa
MTDILQSAAPVPLVRSDMNLVWLDMEMTGLDPDSDRIIEIAVVVTNSTLDRMAEGPVLAI
HQSDETLAKMDQWNQNTHGRSGLIDRVKASTVGEIEATEQIRAFLAQYVPPGKSPMCGNS
ICQDRRFMARWMPELETFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESI
DELKYYREHFLIPPAPDASMNAE
NT seq 612 nt   +upstreamnt  +downstreamnt
atgactgacatcctccaatccgctgcaccagtgccgctcgtgcgcagcgacatgaacctc
gtctggctggacatggaaatgaccgggctcgatccggactccgaccgcatcatcgaaatc
gccgtagtggtcacgaattcgacgctggacagaatggccgaaggtccggttctcgcgatc
catcagagcgacgagacgctcgcaaaaatggaccagtggaatcagaacacgcatgggcgt
tccgggttgatcgaccgtgtgaaggcgtccaccgtcggcgagatcgaggccaccgaacag
atccgcgcgtttctcgcgcagtacgtgccgcccggcaaatcgccgatgtgcggcaactcg
atctgccaggaccgccgcttcatggcgcgctggatgcccgagctcgagacgttcttccac
taccgcaacctggacgtgagcacgctgaaggaactgtgccgccgctggcagcccgcgatc
tacaagggcttccagaagcgcgcgatgcacacggcgctggccgacatccacgagtcgatc
gacgaactgaagtactaccgcgaacacttcctcattccgccggcgcccgacgcctcgatg
aacgccgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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