KEGG T04094: AC233

Burkholderia sp. HB1: AC233_20705

Entry

AC233_20705       CDS       T04094

Name

(GenBank) DNA topoisomerase

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

buq Burkholderia sp. HB1

Brite

KEGG Orthology (KO) [BR:buq00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:buq03032]
    AC233_20705
   03400 DNA repair and recombination proteins [BR:buq03400]
    AC233_20705
Enzymes [BR:buq01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     AC233_20705
DNA replication proteins [BR:buq03032]
Prokaryotic type
  DNA Topoisomerases
   AC233_20705
DNA repair and recombination proteins [BR:buq03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AC233_20705

SSDB

Motif

Pfam:

Topoisom_I Top1B_N_bact

Other DBs

NCBI-ProteinID:

ALE56903

Position

2:151828..153198

AA seq 456 aa
MAMTNSTTQNGHASTDDSAKQAAPAAMPPGLRHADDSKPGYTRKREKEGFAYFDVEGKRI
EDEAEIQRINSLAIPPAYEDVWICPDPRGHIQATGRDVRGRKQYRYHPRWRETRDADKYE
RMAEFGRALPRIRARVARDLELPGMPADKVFAAVVRLLDTTLVRVGSVEYARENQSYGLT
TLRKKHVKVEAGQLRFRFRGKSGIEHDVTVDDPRVKRIVRRCAELPGHDLFQYLDEDGTR
RTVGSADINDYLRRASGADFTAKDYRTWAGSVYALATLRRLVCESATEARRHIVATVKEV
AGLLRNTPAVCRRCYIHPAVISAFEADELQTLPPGQSRRGLKVDEVAFAALLAHAEKRAA
KLARQAGAKGRKLREAQAADSINGSISTLLQKSRVIRKEANKAAAKAGAKTGRAARAKVN
EEVTGKASRKTGARSTRRAAGERVGSPQSADKPAAS

NT seq 1371 nt +upstreamnt +downstreamnt
atggctatgacgaacagcacaactcaaaacggtcatgcatcgaccgacgacagcgcgaag
caggccgcgcccgccgcgatgccgcctggtttgcgccacgccgacgacagcaagcctggc
tacacacgcaagcgcgagaaagaaggcttcgcgtatttcgacgtcgaaggaaaacgcatt
gaagacgaagcggaaatccagcgcatcaactcgcttgcgattccgcccgcctatgaggac
gtatggatttgccccgatccgcgcggccacattcaggcgaccggacgcgacgtgcgcggc
cgcaagcaataccgttatcacccgcgctggcgcgaaacgcgcgacgcggacaagtacgaa
cgcatggcggaattcggccgcgcgttgccaaggattcgcgcccgcgtcgcgcgcgatctc
gaactgccgggcatgcctgccgacaaggtgttcgcggccgtcgtgcggctgctcgatacg
acgcttgtgcgcgtcggcagcgtcgaatatgcgcgcgaaaatcagtcatacggtttgacg
acgctgcgcaagaaacatgtgaaggtcgaagcgggacagttgcgtttcaggtttcgcggc
aagagcggcatcgagcacgacgtcacggtcgacgacccgcgcgtgaagcgcatcgtgcgg
cgctgtgcggaactgccggggcacgacctgttccagtatctcgacgaggacggcacgcgc
cgcaccgtcggctctgccgacatcaacgactatctgcgccgtgcaagcggcgcggacttc
accgcgaaagactatcggacatgggccggcagcgtgtatgcgctcgcaacgctgcggcgc
ctcgtgtgcgagagcgccacggaagcgcggcgccatatcgtcgcgaccgtgaaggaagtc
gcgggcctgctgcgcaatacgcccgctgtctgccggcgctgctatatccatccggccgtc
atcagcgcattcgaagccgacgaattgcagaccttgccgccgggccagtcgaggcgcggt
ctgaaagtggacgaagtggcgtttgccgcgttgctcgcacatgcggaaaaacgcgcggcg
aaactcgcgcgtcaggcgggcgcgaagggccgcaagctgcgcgaagcacaagccgccgac
agcatcaacggctcgatttcgacgctgcttcagaagtcgcgtgtgattcgcaaggaagcg
aacaaggccgcggcgaaagccggcgcaaaaaccggccgggctgctcgcgctaaggtcaac
gaggaagtcaccggaaaagccagccggaaaaccggcgcgcgaagcacgcggcgagccgcg
ggggagcgcgtcggctcgccgcagtccgcggacaaacccgcagcgagttga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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