KEGG   Burkholderia mayonis: WS70_05420
Entry
WS70_05420        CDS       T06044                                 
Name
(GenBank) ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
buu  Burkholderia mayonis
Pathway
buu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:buu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    WS70_05420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:buu03019]
    WS70_05420
   03009 Ribosome biogenesis [BR:buu03009]
    WS70_05420
Enzymes [BR:buu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     WS70_05420
Messenger RNA biogenesis [BR:buu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     WS70_05420
Ribosome biogenesis [BR:buu03009]
 Prokaryotic type
  rRNA processing factors
   WS70_05420
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1
Other DBs
NCBI-ProteinID: AOJ01335
UniProt: A0A1B4FCD6
Position
1:complement(1178853..1182017)
AA seq 1054 aa
MKRMLFNATQQEELRVAIVDGQKLIDIDIETAGREQRKGNIYKGVVTRIEPSLEACFVNY
GEDRHGFLPFKEVARQYFKEGVDMRSARIQDALREGQELIVQVEKEERGNKGAALTTFIS
LAGRYLVLMPNNPRGGGVSRRIEGDERQELRETMAQLQIPDGMSMIARTAGIGRSAEELQ
WDLNYLLQLWHAIEAASQSGHPGQPMLIYLESSLVIRAIRDYFQPDIGEILIDTTEIYDQ
ARAFMDIVMPDNVGKVKRYHDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALV
AIDVNSARATKGADIEETATRTNLEAADEVARQLRLRDLGGLIVIDFIDMESAKSQREVE
QRLKDALKHDRARVQMGKISRFGLMELSRQRLRPALSEGSHVTCPRCNGTGHIRDTESSA
LQVLRIIQEEAMKENTAAIHCQVPVEVTAFLLNEKRQEINKIESRFKVGVVLIPNKHLDT
PHYKLERLRHDDARLDDPRASWKMAEEAARELEAETGYSKRAEETKPRQEAAVKGITPER
PAPSPAPQRQPAPEAAPVAVAPASGGFVKWLKNLFGMQPAVAPAPAPAVKEPAARPARER
GERGEKAERGGDRNRNRRGSGGAQQAGGRDQAAAGGGRGQAPRAEREAKETREPREGREA
REGREGREARGGRDNREGREGREARETREPREQREPREPRERAETADAAEAPRSERRERG
ERRKPVPHVATLETVNRGESAHAEPIEQPAHAPGAEAGVEADSNARDGEERRRRRRGRRG
GRREREDETAGAAQAAEASEGATAETAAYAAEAPQGFAPIADHEPQHAGQAGAGVAAVAA
AAVATEAIAHVERGVKVEAQAAAEAPAVSAEPIAAAPARAVEAPAEAAPAATHAEPAPVE
STHEQAAPANAAPAEATPAEAPAAEASEATAPAVAPTPIAKPAPAVVEPQPAPAAVAPAE
ASVAHEPATVAETQAPSAAVAEAVAPAAVAAPSASLETVLESAGLVWVNTDTDKLRAAQA
AAAQIAPPVRAPRERKPLPPVETAPMQQVETTHR
NT seq 3165 nt   +upstreamnt  +downstreamnt
atgaaacgcatgctgttcaatgcgacgcagcaggaagaactgcgcgtcgccatcgtcgat
gggcagaagctcatcgacatcgacatcgaaaccgccggacgcgaacaacgcaaaggcaat
atctacaagggcgtcgtcacccgcatcgaaccgtcgctcgaagcctgcttcgtcaactac
ggcgaagaccgccacggcttcctgccgttcaaggaagtcgcccgccagtacttcaaggaa
ggcgtcgacatgcgctccgcgcgcatccaggacgcactgcgcgaaggccaggagctgatc
gtccaggtcgaaaaggaggagcgcggcaacaagggcgcggcgctcaccacgttcatctcg
ctcgccggccgctacctcgtgctgatgccgaacaacccgcgcggcggcggcgtgtcgcgc
cgcatcgagggcgacgagcgccaggagctgcgcgagacgatggcgcagcttcagatcccc
gacggcatgagcatgatcgcccgcacggcgggcatcggccgcagcgccgaggaactgcaa
tgggacctgaactacctgctgcagctctggcacgcgatcgaggcggcgtcgcaaagcggc
catcccggccagccgatgctgatctacctcgaatcgagcctcgtgatccgcgcgatccgg
gactatttccagccggacatcggcgaaatcctgatcgacacgacagagatctacgatcag
gcccgcgcattcatggacatcgtgatgcccgacaacgtcggcaaggtgaagcgctatcac
gacgacgtccccctcttctcgcgcttccagatcgagcaccagatcgagaccgcgtactcg
cgcacggtgccgctgccgtcgggcggcgcgatcgtgatcgatcacaccgaggcgctcgtc
gcgatcgacgtgaactcggcgcgcgcgacgaagggcgcggacatcgaggagacggcgacc
cgcacgaacctcgaagcggccgacgaagtcgcgcgccagctccgtctgcgcgacctgggc
ggcctcatcgtgatcgacttcatcgacatggagtcggcgaagagccagcgtgaagtcgag
cagcgtctgaaggacgcgctcaagcacgaccgtgcgcgcgtgcagatgggcaagatctcg
cgcttcggcctgatggagctgtcgcgccagcgcctgcgcccggcgctgtccgaaggcagc
cacgtcacctgcccgcgctgcaacggcacgggccacatccgcgacaccgaatcgtccgcg
ctgcaagtgctgcggatcattcaggaagaggcgatgaaggagaacaccgcggcgatccac
tgtcaggtgcccgtcgaggtgaccgccttcctgctcaacgaaaagcgtcaggaaatcaac
aagatcgagtcgcgcttcaaggtcggcgtcgtgctgatcccgaacaagcatctcgatacg
ccgcactacaagctcgagcgcctgcgtcacgacgatgcgcgcctcgacgatccgcgcgcc
tcgtggaagatggccgaggaagccgcccgcgagctcgaggcggaaaccggctacagcaag
cgcgccgaggaaacgaagccgcgccaggaagcggccgtcaagggcatcacgcccgaacgc
cccgcaccgagccccgcgccacagcgccagcccgcaccggaggcggcgcccgtggccgtc
gcgccagcaagtggcggcttcgtcaagtggctgaagaacctgttcggcatgcagccggcc
gtggcgcccgcaccggcgcccgctgtcaaggaaccggccgcgcgtccggcgcgcgagcgc
ggtgagcgcggtgagaaggccgagcgcggcggcgatcgcaaccgcaaccgtcgcggcagt
ggcggcgcgcagcaggcaggcggacgcgaccaggccgctgcaggcggcggacgcggtcag
gccccgcgcgccgagcgcgaagccaaggaaacccgcgaaccgcgcgaaggccgcgaggcc
cgagaaggtcgtgaaggtcgtgaagcacgcggcggccgggacaatcgcgaaggccgcgaa
ggccgcgaagcacgcgaaacccgtgagccgcgcgagcaacgtgagccgcgtgagccgcgt
gagcgcgcggagacagccgatgccgctgaagcgccgcgcagcgagcgccgtgaacgcggc
gagcgccgcaagccggtcccgcacgtcgcaacgctcgaaaccgtgaaccgcggcgaaagc
gcccacgcggagccgatcgagcagccggctcatgcgcccggcgcggaagccggcgtcgaa
gcggattcgaacgcccgcgacggcgaggaacgccgccgtcgccgccgcggtcgccgcggt
ggccgccgcgagcgtgaagacgaaaccgcaggcgcagcacaagcggcggaagccagcgaa
ggcgcgacggccgaaacggccgcatacgcagccgaagcgccgcaaggcttcgcgccaatc
gccgaccacgagccgcagcacgccggacaagcgggtgcaggcgtggcggcggttgcggcc
gcggcagtcgccacggaagcgatcgctcacgtcgagcgcggcgtgaaggtcgaggcgcaa
gcggccgccgaagcgcctgccgtttcggccgagccgatcgccgcagcgccggctcgtgcc
gtcgaagcacctgcggaagccgcgccggctgcgacgcatgccgaaccggctccggtcgaa
agcacgcacgagcaagccgctccggccaacgctgctcccgctgaagccacgccggccgaa
gcgcctgccgcggaagcgtccgaagccaccgccccggcggttgctccgaccccgatcgcc
aagccggccccggcagtcgtcgagccgcagcccgcgcccgccgcagtcgcccctgccgag
gcaagcgtcgcgcacgagccggccaccgtcgccgagacacaagcaccgtcggcggccgtc
gccgaggccgtcgcaccggctgcggtagcagccccgagcgcgagcctcgaaacggtgctc
gaatccgccggactcgtctgggtcaacacggacacggacaagctgcgcgcggcgcaagcc
gccgccgcgcagatcgcgccgcccgtccgtgcgccgcgcgaacgcaagccgctgccgccc
gtcgaaacggcgccgatgcagcaagtcgagacgacgcaccgctga

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