KEGG   Paraburkholderia phytofirmans OLGA172: AYM40_08090
Entry
AYM40_08090       CDS       T05111                                 
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
buz  Paraburkholderia phytofirmans OLGA172
Pathway
buz00010  Glycolysis / Gluconeogenesis
buz00020  Citrate cycle (TCA cycle)
buz00260  Glycine, serine and threonine metabolism
buz00280  Valine, leucine and isoleucine degradation
buz00310  Lysine degradation
buz00380  Tryptophan metabolism
buz00620  Pyruvate metabolism
buz00630  Glyoxylate and dicarboxylate metabolism
buz00640  Propanoate metabolism
buz00785  Lipoic acid metabolism
buz01100  Metabolic pathways
buz01110  Biosynthesis of secondary metabolites
buz01120  Microbial metabolism in diverse environments
buz01200  Carbon metabolism
buz01210  2-Oxocarboxylic acid metabolism
buz01240  Biosynthesis of cofactors
Module
buz_M00009  Citrate cycle (TCA cycle, Krebs cycle)
buz_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
buz_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
buz_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
buz_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:buz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    AYM40_08090
   00020 Citrate cycle (TCA cycle)
    AYM40_08090
   00620 Pyruvate metabolism
    AYM40_08090
   00630 Glyoxylate and dicarboxylate metabolism
    AYM40_08090
   00640 Propanoate metabolism
    AYM40_08090
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    AYM40_08090
   00280 Valine, leucine and isoleucine degradation
    AYM40_08090
   00310 Lysine degradation
    AYM40_08090
   00380 Tryptophan metabolism
    AYM40_08090
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    AYM40_08090
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:buz04147]
    AYM40_08090
Enzymes [BR:buz01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     AYM40_08090
Exosome [BR:buz04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   AYM40_08090
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 HI0933_like FAD_binding_2 NAD_binding_8 AlaDh_PNT_C FAD_oxidored FAD_binding_3 GIDA Lys_Orn_oxgnase DAO 3HCDH_N Thi4 Amino_oxidase Lycopene_cycl
Other DBs
NCBI-ProteinID: ANB72325
UniProt: A0A160FJB6
Position
1:1889912..1891342
AA seq 476 aa
MSKEFDVVVIGAGPGGYIAAIRAAQLGKTVACIEKWKNPAGALKLGGTCLNVGCIPSKAL
LASSEEFENASHHLADHGISVSDVKVDIAKMLARKEGIVEKMTKGIEFLFRKNKITWLKG
HGKFTGKTDAGVQIEVSGEGETEVVTAKNVIIATGSKARHLPTVPVDNKIVADNEGALTF
DSVPKKLAVIGAGVIGLELGSVWRRLGSDVTVLEALPEFLGAADQALAKEAAKQFKKQGL
DIHVGVKVGEVKTTDNSVTINYTDKDGNAQTLEADRLIVSIGRVPNTENLGLEAIGLKAN
ERGFIDVDDHCATAVPNVYAIGDVVRGPMLAHKAEDEGVMVAEIIDGQKPHIDYNCVPWV
IYTEPEIAWVGKTEQQLKAEGREVKTGQFPFMANGRALGINKADGFVKMIADAKTDELLG
VHIISANASDLIAEAVVAMEFKAASEDIGRICHPHPSLSEVMREAALAVDKRALNM
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgtccaaagaatttgacgtcgtcgtgatcggcgcaggccccggcggctacatcgccgca
atccgcgcagcgcaactcggcaagaccgtcgcatgtatcgaaaagtggaagaacccggcc
ggcgcgctgaagctcggcggcacctgcctgaacgtgggttgcattccgtcgaaggcgctg
ctcgcgtcgtcggaagaatttgaaaacgcgtcgcaccacctcgctgatcacggcatctcc
gtgtcggacgtgaaggtcgatatcgcgaagatgctggcccgcaaggaaggcatcgtcgag
aagatgaccaagggtatcgaattcctgttccgcaagaacaagatcacgtggctcaagggc
catggcaagttcaccggcaagacggacgccggcgtgcagatcgaagtcagcggcgaaggc
gagactgaagtcgtgacggcgaagaacgtcatcatcgccacgggttcgaaggcgcgccat
ctgccgaccgttccggtcgacaacaagatcgtcgccgacaacgaaggcgcactgacattc
gactccgtgccgaagaagctcgccgtgatcggcgccggcgtgatcggtctggaactcggc
tcggtatggcgccgtctgggttcggacgtgaccgtgctcgaagcgctgccggaattcctc
ggcgcggctgaccaggcgctggctaaggaagccgccaagcaattcaagaagcaaggtctg
gacattcacgtcggtgtgaaagtcggcgaagtgaagacgaccgacaacagcgtcacgatc
aattacacggacaaggacggcaacgcgcaaacgctcgaagccgaccgcctgatcgtgtcg
atcggccgcgtgccgaacaccgagaacctcggtctcgaagccatcggcctgaaggcgaac
gagcgcggcttcatcgacgtcgacgaccactgcgcaacggctgtgccgaacgtgtacgcg
atcggcgacgtagtgcgtggcccgatgctcgcgcacaaggctgaagacgaaggcgtgatg
gttgcagaaatcatcgacggccagaagccgcatatcgactacaactgcgttccgtgggtg
atctacaccgaaccggaaatcgcatgggtcggcaagaccgagcagcaactgaaggctgaa
ggccgcgaggtcaagacgggccagttcccgttcatggcgaacggccgcgcgctgggcatc
aacaaggcggatggtttcgtcaagatgatcgccgacgcgaagaccgacgagctgctgggc
gtgcacatcatctcggcgaacgcatcggatctgatcgcggaagccgtggtggcgatggaa
ttcaaggcggcgtcggaagacatcggccgcatttgccatccgcacccgtcgctctcggaa
gtcatgcgcgaagcggctctcgccgtggacaagcgcgcgctgaacatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (86)   

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