KEGG   Paraburkholderia phytofirmans OLGA172: AYM40_13485
Entry
AYM40_13485       CDS       T05111                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
buz  Paraburkholderia phytofirmans OLGA172
Pathway
buz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:buz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AYM40_13485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:buz03400]
    AYM40_13485
Enzymes [BR:buz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     AYM40_13485
DNA repair and recombination proteins [BR:buz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     AYM40_13485
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: ANB73260
UniProt: A0A160FL68
Position
1:3083359..3084135
AA seq 258 aa
MKIATWNVNSLKVRLQHVIDWLETSHTDVLCLQELKLTDDKFPRAELEEKGYRSWFAGQK
TYNGVGILVRKGLNVDESSIVRNIPGFEDPQQRVIAATIEGVRIVSAYFPNGQAPGTDKF
AYKLRWLAALHDWIASEMAPYPKLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAEFV
RLIELGLVDAFRQFEQPEKIYSWWDYRMMAFRRNAGLRIDHILLSKALAEICSSCDVDKV
PRKWDQPSDHAPVVAQLG
NT seq 777 nt   +upstreamnt  +downstreamnt
atgaaaatcgccacctggaacgtcaactccctcaaagtccgcctgcagcacgtcatcgat
tggctcgaaaccagccacaccgatgtgctgtgcctgcaggaactgaagctgaccgacgac
aaatttccccgcgccgagctcgaagaaaaaggctaccggagctggttcgccggccagaag
acctataacggcgtcggcatcctggtgcgcaaaggcctgaacgtcgacgaaagcagcatc
gtgcgcaacatcccgggttttgaagacccgcagcaacgcgtgatcgccgcaaccatcgaa
ggcgtgcgcatcgtctccgcgtacttcccgaacggccaggcgccgggtaccgacaaattc
gcctacaagctgcgctggctcgccgcactgcacgattggatcgcgagcgaaatggcgccg
tatccgaagctcgcgctgctcggcgactacaacatcgcgccggaagatcgcgacgtgcac
gatccgaaagcgtgggaaggccagaatctggtgtcgcccgaagagcgtgccgaattcgtg
cggctgattgaactcggtctcgtcgatgcgttccgccagttcgagcagccggagaaaatc
tactcgtggtgggactaccggatgatggcgttccgccgcaatgcggggctgcgcatcgac
catattctgctgtcgaaagcccttgccgaaatctgctcgtcctgcgatgtcgacaaggtg
ccgcgcaagtgggatcagccgtcggaccacgcaccggtcgtcgcacagctcggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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