KEGG   Paraburkholderia phytofirmans OLGA172: AYM40_21725
Entry
AYM40_21725       CDS       T05111                                 
Symbol
gabD
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
  KO
K00135  succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Organism
buz  Paraburkholderia phytofirmans OLGA172
Pathway
buz00250  Alanine, aspartate and glutamate metabolism
buz00310  Lysine degradation
buz00350  Tyrosine metabolism
buz00650  Butanoate metabolism
buz00760  Nicotinate and nicotinamide metabolism
buz01100  Metabolic pathways
buz01120  Microbial metabolism in diverse environments
Module
buz_M00027  GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:buz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    AYM40_21725 (gabD)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    AYM40_21725 (gabD)
   00310 Lysine degradation
    AYM40_21725 (gabD)
   00350 Tyrosine metabolism
    AYM40_21725 (gabD)
  09108 Metabolism of cofactors and vitamins
   00760 Nicotinate and nicotinamide metabolism
    AYM40_21725 (gabD)
Enzymes [BR:buz01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.16  succinate-semialdehyde dehydrogenase [NAD(P)+]
     AYM40_21725 (gabD)
    1.2.1.20  glutarate-semialdehyde dehydrogenase
     AYM40_21725 (gabD)
    1.2.1.79  succinate-semialdehyde dehydrogenase (NADP+)
     AYM40_21725 (gabD)
SSDB
Motif
Pfam: Aldedh DUF6515
Other DBs
NCBI-ProteinID: ANB75049
UniProt: A0A160FQA6
Position
2:305427..306866
AA seq 479 aa
MNEFLRTGHYIDGEWYESASTYPVLNPATGEVIAQVAKGGAPETMQAVAAAERAFPVWRS
ITAKERGARVRRWGELMLENRGALAELLTREQGKPLAEARGEVGYAASFLEWFAEEAKRS
YGDVIPSPNPNAKIIVTREPVGVVAAITPWNFPLAMITRKAGPALAAGCTMVLKPSEETP
LSALALAALAEKAGIPPGVFNIVSGDAVAIGGVLTESEVVRKLSFTGSTRVGKLLAKQSA
DTLKKLSLELGGNAPFIVFDDADIDAAVQGAMASKFRNTGQTCVCVNRFYVQDGVYDAFT
QELTQAVRKMRIGNALQGEVEQGPLINQAALKKVGAHVADALQKGAKVLTGGKPHALGGT
FYEPTVLIDASKSMLIAAEETFGPVAACFRFKTENEAVAAANDTPFGLSAYFYTRDLARA
WRVAEALESGMVGINEGILSTEVAPFGGVKQSGLGREGSKYGLDEYTELKYMMMGGLGR
NT seq 1440 nt   +upstreamnt  +downstreamnt
gtgaacgaatttcttcgaaccgggcattacatagatggcgagtggtacgaaagcgcgagc
acgtatcccgttctgaatcctgcaacgggcgaggtgatcgctcaagtcgccaagggcggc
gccccggaaacgatgcaagccgtcgccgcggcggagcgagcctttccggtatggcgctcg
ataacagccaaagaacgtggcgcgcgtgtcagacgctggggcgagttgatgctcgaaaac
cgcggcgcgctcgccgaactgctgacccgcgaacaaggcaaaccgctcgccgaagcacgt
ggcgaagtcggctatgcggcgagcttcctcgaatggttcgccgaggaagccaagcgcagt
tatggcgacgtgatcccgagcccgaatccgaacgcgaagatcatcgtgacacgcgaaccg
gtcggcgtggtcgcggcgatcacgccgtggaatttcccgctcgcgatgattacgcgcaag
gccggcccggcgctcgcggcaggctgcacgatggtgctcaagccttctgaagaaacgccg
ttgtccgccttggcgctggcggcactggcagagaaggccggcattccacccggcgtgttc
aacatcgtttccggcgatgcagtcgcgatcggcggcgtgctgactgagtcggaggtggtg
cgcaagctgtcgttcaccggctcgacgcgcgtcggcaaactgctcgcaaagcagtcggcg
gatacgctgaagaagctgtctttggagcttggcggcaatgcgcccttcatcgtattcgac
gatgcagatatcgacgccgccgtgcagggcgcgatggcgtcgaaattccgcaacaccggg
cagacctgcgtgtgcgtgaaccgcttctacgtgcaggacggcgtctacgacgcgttcacg
caggagctgacacaagccgtgcggaagatgcgaatcggcaacgcgctgcaaggcgaggtt
gagcaaggcccgctgatcaaccaggcggcgctgaagaaggtgggggcgcacgtcgccgac
gcgttgcagaaaggcgcgaaggtgctgaccggcggcaaaccgcacgcactcggcggcaca
ttctatgagccgaccgtgctgatcgatgcgtcgaagtcgatgctgatcgccgcggaagaa
accttcggcccggtggcggcgtgctttcgcttcaagactgaaaacgaagccgtcgcggca
gccaacgacacaccgttcggcctctccgcctatttctatacgcgtgatttggcgcgtgca
tggcgcgttgcggaagcgctggagagcggcatggtcggcattaacgaagggattctgtcg
accgaagtcgcgccgttcggcggcgtcaagcaatcgggcctcggccgtgaaggttcgaag
tatgggctcgatgaatacacggaactgaagtacatgatgatgggcgggctcgggcgctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (7)   
   KEGG MODULE (3)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

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