KEGG   Burkholderia vietnamiensis LMG 10929: AK36_2090
Entry
AK36_2090         CDS       T03893                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
bve  Burkholderia vietnamiensis LMG 10929
Pathway
bve03030  DNA replication
bve03430  Mismatch repair
bve03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bve00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AK36_2090 (dnaX)
   03430 Mismatch repair
    AK36_2090 (dnaX)
   03440 Homologous recombination
    AK36_2090 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bve03032]
    AK36_2090 (dnaX)
   03400 DNA repair and recombination proteins [BR:bve03400]
    AK36_2090 (dnaX)
Enzymes [BR:bve01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AK36_2090 (dnaX)
DNA replication proteins [BR:bve03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AK36_2090 (dnaX)
DNA repair and recombination proteins [BR:bve03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AK36_2090 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_5 AAA RuvB_N AAA_16 AAA_14 AAA_22 DUF3646 AAA_5 AAA_assoc_2 TsaE AAA_18 Mg_chelatase AAA_2 Glyco_tranf_2_5 AAA_24 nSTAND3
Other DBs
NCBI-ProteinID: AJY07385
Position
I:2259065..2261659
AA seq 864 aa
MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK
ALNCETGVTSQPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLERILGEEQISFEQQALRLLARAAQGSMRDALSLTDQAIAYSANEVTESAVSGM
LGALDQTYMVRLLDALAAGDGPEILAIADEMSLRSLSFSTALQDLASLLHRIAWAQFAPG
SVLDEWPEAADLRRFAQTLSPEKVQLFYQIATVGRAELGLAPDEYAGFTMTLLRMLAFEP
AVGSGSAPGGEPAVPRGVPAAAPRAAAAAAAAAAAATPRAAVSGGAGEAARPQAAAPVVP
AARSASAQSTAPAKSSAPNQSSAPSQSSGSSQSTASDQSTASDQSTASNRSAASAQSATP
AQSPVPTQSQAPAETPAPAQSADAAPTPAANPAAAQAPVVATPEAPVAASAQAASAACTA
PANDARPSAPSEPDAPAVASRSAAPAPSTAPAPSTAPAEPAPAESAPRASARGGAAAALD
VLRNAGMRVSSERSRPGAAPKAAAAQPAAEKPAPSRPAVVVPSPRAAARAPQPADARQAP
PPWEDIPPDEYVPLSADEMFGAAADDGFVPVFDSGPDDLRIAPKPAEARPSAPLDTRPLP
PAIALDAIGFDGEWPALAARLPLKGVAYQLAFNSELTAVDATTLKLSVPVPQYADAAQVT
KLKAALADALGKPVEVLVEVGPARRTAAALDAAARAARQREAEQEIHGDPFVQQLMREFG
ARIVDGSVRPLADAAPDGASPTLH
NT seq 2595 nt   +upstreamnt  +downstreamnt
atgacctatcaagttctcgcacgcaagtggcgtccgaaggatttcgcttcgctcgtcggc
caggagcacgtcgtcagggcgctcacgcacgcgctcgacggcgggcgtctccatcacgcc
tatctgtttaccgggacccgcggcgtcggcaagaccacgctgtcgcggatcttcgcgaag
gcgctcaactgtgaaaccggcgtcacgtcgcagccgtgcggcgtgtgccgcgcgtgccgc
gagatcgacgaaggccgcttcgtcgactacgtcgagatggacgccgcgagcaaccgcggc
gtcgacgaaatggccgcgctgctcgagcgcgcggtgtacgcgccggtcgatgcgcgcttc
aaggtctacatgatcgacgaagtgcacatgctgacgaatcacgcgttcaacgcgatgctc
aagacgctcgaggagccgccgccgcacgtcaagttcattctcgcgacgaccgatccgcag
aagattcccgtcaccgtgctgtcgcgctgcctgcagttcaatctgaagcagatgccggcc
ggccacatcgtgtcgcacctcgagcggattctcggcgaagagcagatttcgttcgagcaa
caggcgctacgcctgcttgcgcgcgcggcgcagggcagcatgcgcgatgcgctgtcgctg
accgaccaggcgatcgcgtattcggcgaacgaagtgaccgaatcggcggtgtcgggcatg
ctcggcgcgctcgatcagacctacatggtgcgtctgctcgacgcgctcgcggccggtgac
ggccccgaaatcctcgcgatcgccgacgagatgtcgctgcgcagcctgtccttttcgacg
gcgctgcaggatctcgcgagcctgctgcatcggattgcatgggcgcagttcgcgccgggc
tcggtgctcgacgaatggccggaggcggccgacctgcgccggttcgcgcagacgctgagc
cccgagaaggttcagctgttctatcagatcgcaacggtcgggcgcgcggagctcggcttg
gcgcccgacgaatatgcgggcttcacgatgacgctgctgcggatgctcgcgttcgagccg
gctgtcggctcgggcagcgcgcccggtggtgagcccgccgtgccgcgtggggtgccggcg
gctgcgccgcgcgcggctgctgctgctgctgccgctgctgccgctgcgacgccgcgtgct
gcggtatcgggcggggcaggcgaagcggcgcgtccgcaggccgccgcgccggttgtgcct
gcggcgcgttcggcgtcggctcaatccaccgcgccggccaaatcttcggcaccgaatcaa
tcttcggcgccgagccaatcttcgggatcgagccaatccacggcatcggaccaatccacg
gcatcggaccaatccacggcatcgaaccgatccgcggcatcggcacagtccgcgacaccg
gcacaatccccggtgccgacccagtcacaggcgccggccgaaaccccggcaccggcccaa
tccgccgacgcagcccctacgcccgccgcgaaccctgctgctgcgcaagcaccggtagtg
gcgacgcctgaagcaccggtcgctgcttccgctcaagccgcgtcggcagcgtgcaccgca
ccggcaaacgatgcacgtccgtcggcgccgtcagagcctgacgcgcccgctgtcgcatcg
cgcagcgccgcccccgcaccgtccaccgcgccggcaccgtccaccgcgccggccgagcct
gcgccggccgagtcggcgccgcgtgcctccgcccgcggcggcgcggccgccgcgctcgac
gtgttgcgcaacgcgggcatgcgcgtgtcgtccgaacgctcgcggcccggcgccgcgccg
aaggcagccgccgcacaaccggcggccgaaaagcccgcgccgtcgcgtccggccgtcgtg
gtgcccagtccacgtgccgccgcccgcgcgccgcagcctgccgatgcgcgccaggcgccg
ccgccgtgggaagacattccgcccgacgaatacgtgccgctgagcgccgacgagatgttc
ggcgccgcggccgatgacggcttcgtgccggtattcgacagcggcccggacgacctgcgc
atcgcgccgaagccggcggaagcgcggccgtcggcgccgctcgacacgcgtccgctgccg
cccgcgatcgcgctcgatgcgatcggcttcgacggcgaatggccggcgcttgccgcacgg
ctgccgctgaagggcgtcgcgtatcagctcgcgttcaacagcgagctgacggccgtcgat
gcgactacgttgaagttgtcggtgccggtgccgcagtatgcggacgctgcccaggtcacg
aagctgaaggccgcgctcgccgatgcgctcggcaagcccgtggaggttctggtcgaggtg
gggccggcgcggcgcacggcggcggcgctcgacgcggccgcgcgcgcggcgcgccagcgc
gaggctgagcaggagatccacggcgatccgttcgtccagcagctgatgcgcgagttcggc
gcgcgtatcgtcgacggctcggtgcgcccgctcgcggatgccgcgccggacggcgcgtcg
ccgaccttgcattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (18)   
   Pfam (18)   
All databases (30)   

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