KEGG   Burkholderia vietnamiensis LMG 10929: AK36_2665
Entry
AK36_2665         CDS       T03893                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
bve  Burkholderia vietnamiensis LMG 10929
Pathway
bve03030  DNA replication
bve03430  Mismatch repair
bve03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bve00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AK36_2665 (dnaQ)
   03430 Mismatch repair
    AK36_2665 (dnaQ)
   03440 Homologous recombination
    AK36_2665 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bve03032]
    AK36_2665 (dnaQ)
   03400 DNA repair and recombination proteins [BR:bve03400]
    AK36_2665 (dnaQ)
Enzymes [BR:bve01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AK36_2665 (dnaQ)
DNA replication proteins [BR:bve03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AK36_2665 (dnaQ)
DNA repair and recombination proteins [BR:bve03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AK36_2665 (dnaQ)
SSDB
Motif
Pfam: RNase_T RNase_H_2 Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AJY06459
Position
I:2901989..2902723
AA seq 244 aa
MRQIILDTETTGLNPRSGDRLIEIGCVELLNRRLTGNNLHIYVNPERDSDPGALAVHGLT
TEFLSDKPKFAEVADQIRDFVKGAELIIHNAPFDLGFLDAEFARLGLPPFIEHCDGVIDT
LAEAKQMFPGKRNSLDALCDRFGISNAHRTLHGALLDSELLAEVYLAMTRGQDSLVIDML
DDPGADGGTANGQRISLASLDLPVVAASDDELAAHQAQLDELDKSVKGTCVWRTSAEVDA
VEAA
NT seq 735 nt   +upstreamnt  +downstreamnt
atgcgccagatcattctcgataccgaaaccaccggcctcaatccccgctcgggcgatcgc
ctgatcgaaatcggctgcgtggagctgctgaaccggcggctcaccggcaacaacctgcac
atctacgtgaaccccgagcgcgacagcgatccgggcgcgctggccgtgcacgggctgacc
accgagtttctgagcgacaagccgaagttcgcggaagtcgccgaccagatccgcgacttc
gtgaagggcgcggaactgatcatccacaacgcaccgttcgacctcgggttcctcgatgcc
gaattcgcgcggctcggcctgccgccgttcatcgagcattgcgacggcgtgatcgacacg
ctggcagaggccaagcagatgttccccggcaagcgcaattcgctcgacgcgctgtgcgac
cggttcggcatcagcaacgcgcaccgcacgctgcacggcgcactgcttgactcggagctg
ctcgccgaggtctatctcgcgatgacgcgcggccaggacagcctcgtgatcgacatgctc
gacgacccaggcgccgacggcggcacggcgaacggccagcgcatctcgctcgcgtcgctc
gacctgccggtcgtcgcggccagcgacgacgagctcgccgcgcaccaggcgcagctcgac
gagttggacaagtcggtcaagggcacctgcgtctggcgcacgtccgccgaagtggacgcc
gtcgaagcggcctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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