KEGG   Beta vulgaris (sugar beet): 104887486
Entry
104887486         CDS       T03548                                 
Name
(RefSeq) intron-binding protein aquarius
  KO
K12874  intron-binding protein aquarius
Organism
bvg  Beta vulgaris (sugar beet)
Pathway
bvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104887486
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bvg03041]
    104887486
Spliceosome [BR:bvg03041]
 Complex B
  Other components
   Prp19-related factors
    104887486
 Complex C
    104887486
SSDB
Motif
Pfam: Aquarius_N_1st Aquarius_N_2nd AAA_11 AAA_12 Aquarius_N_3rd AAA_19 AAA_30 UvrD-helicase ResIII SLFN-g3_helicase UvrD_C_2 AAA_22 AAA AAA_16
Other DBs
NCBI-GeneID: 104887486
NCBI-ProteinID: XP_010670418
Position
2:35429385..35442876
AA seq 1543 aa
MTKVYGTGTYDFKRHRVAEYPVEIAHNIAVEKTPDSIPISNAPNSISLSEIKRDPLTKIA
ADNWIKSGGNDSNSRKPFDSELVKDIYRKELLVKSGRKPVPLQRVMILEISQYLENYLWP
YFDPETASFEHVMSMILMINEKFRENVAAWVCFHDRKDGFKAFLERVLRLKDQGDRFSIA
EKTNYLVFMINVFQSLEDEVVSDTVLRLASLQCWHSLSYGRFQMELCVNPDLIKKWKKMT
KAEAKKAKKRGENYDPSNSLEATFLRNFVMEFLAILDSEVLICTQHDDPGGLSVNGFQEV
DDACVLYCERFMEFLIDLLSQLPTRRYLRPLVADVAVVAKCHLSALYTHGRGKLFSQLVD
LLQFYETFEINDHEGTQLTDDEVLQAHYDRFQSFQLLAFKKIPKLRELALANVGAIHKRV
DLSKKLSVLSPKELKDLVCYKLKLISNNDPWSDRVDFLIEVMVSFFEKQKSQKEAINALP
LYPNEQIMWDESLVPNINYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDI
QEAVPHLLACINNEGETAFRGWSRMAVPIKEFRISEVKQPNIGEVKPAAVTAKITYSISS
YRSHIRSEWDGLKEHDVLFLLSIRPSFEPLSTEEASKATVPQRLGLQCVRGCEVIEIRDE
DGGLMNDFTGRIKRDEWKPPKGELRTVTVALDAAQYHMDVTDIAEKGAEDVYGTFNVLMR
RKPKENNFKAILESIRDLMNETCIVPDWLHNIFLGYGNPSAAQWTNMPDLLETVDFKDTF
LDADHLKDSFPNYQISFLNPDGSENLLPEPPFRIKLPKTLKSNAQALPGNKSNLSASNDA
STIQERLVVETYIPPNPGPYPQDKPKLNAVRFTPTQTGAIISGVQPGLTMVVGPPGTGKT
DTAVQILNVLYHNCPSQRTLIITHSNQALNDLFEKIMERDVPARYLLRLGQGEQELATDL
DFSRQGRVNAMLVRRLELLSEVERLARSLQLPEDVGYTCETAGYFWLLHVYSRWEQFLAA
CADNEDKPTFVQDRFPFKEFFSDAPQPIFTGESFDKDMRAAKGCFRHLKTVFQELEECRA
FELLKSTADRANYLMTKQAKIVAMTCTHAALKRKDFLQLGFKYDNLLMEESAQILEIETF
IPMLLQRQEDGYARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIPYIEL
NAQGRARPSIAELYNWRYRELGDLPYVKQETIFQRANAGFSYDYQLVDVPDYNDRGESAP
SPWFYQNEGEAEYIVSVYMYMRLLGYPANKISILTTYNGQKFLIRDVIKRRCVPYDIIGP
PNKVTTVDKFQGQQNDFILLSLVRSRFVGHLRDVRRLVVAMSRARLGLYVFCRRSLFEQC
YELQPTFQRLLQRPDHLALNLMENMPFTDRRVENTEPAYLVNGVEEMANIVNSKMHQVNQ
ARMMIQQYGTNHIGQGDVSVVKSFHGGQQDLTSVNGMDTERPVLENGEPGQVPPGSNSEE
GADMEEDKTGQNGDAQVENHGEHKTDSKVLADGGEDLSVNMEE
NT seq 4632 nt   +upstreamnt  +downstreamnt
atgacgaaagtatacggaactggaacctacgatttcaagcgtcacagagtagcagaatac
ccagtcgaaatcgcgcataatatcgccgttgaaaaaacccctgattcaatccctatttca
aatgcgcccaattccatcagtctttccgaaattaagcgagacccacttactaagattgca
gccgataattggattaaatccggaggtaatgattccaattccaggaaaccctttgattct
gagcttgtcaaggatatttaccgtaaagagttgctcgtgaagagcggccgaaaaccggtc
ccgttgcagagggttatgattttggagattagccagtatttggagaactatctttggcct
tatttcgaccccgaaaccgccagttttgagcatgttatgtctatgatactcatgatcaat
gagaagtttagagaaaatgtggcagcttgggtgtgttttcatgataggaaagatgggttc
aaagcattcttggagagggttcttcggcttaaggatcagggagatagatttagtattgca
gagaagaccaactacttggttttcatgattaatgtctttcagagtttggaagatgaagtt
gtcagcgatactgtcttaagactggcgagtctgcaatgctggcatagcttgtcatatggt
cgttttcagatggagctatgtgtaaatcctgatttgataaagaaatggaaaaagatgacg
aaagcagaagctaagaaggctaagaaaaggggagagaattatgatccctcaaattctctg
gaagcaacattcttgagaaatttcgtcatggagttcttggcaatattggattctgaggtg
ttaatctgcacacagcatgatgatccaggaggacttagtgtaaatggttttcaagaagtt
gatgatgcttgtgtcttgtactgtgagaggtttatggagttccttattgatttattaagc
caactgccaacaaggagatacttgagacctttggttgctgatgttgcggtggttgccaaa
tgtcacttaagtgcgctttatactcatggaagaggaaagctgttttcgcaattggttgac
ttgctgcaattttatgaaacctttgagattaatgatcatgaagggacacaactgaccgat
gatgaagtccttcaagcacactatgatcgtttccagtcctttcagttgcttgctttcaag
aaaattccaaagttgcgggagctagctttagcaaatgtcggtgcaatacacaagcgtgtt
gatctctcaaagaaattgtctgttctttcacctaaagagcttaaggacctagtgtgctat
aagcttaaactcatttcaaacaatgatccttggtcagacagggttgattttcttattgaa
gtcatggtatccttttttgagaaacaaaagtctcagaaagaagcaataaatgctctccca
ctctacccaaatgagcagatcatgtgggatgaaagtcttgtacctaacattaattactct
ggagaaggatgcctggctctcccaaaacttaacctgcagtttttgaccctgcacgattat
ttgttaagaaattttaatctttttcgtcttgagtcaacatatgaaattcgggaggatatt
caggaagccgtgcctcaccttcttgcctgtattaataatgaaggagaaacagccttccgt
ggttggtcaagaatggctgttcccattaaagaattcaggatttctgaggtgaagcaacca
aacattggggaagtaaaaccagcagcagttacagcaaaaattacttacagcatttccagt
tatagatcacacataagatctgaatgggatggattaaaagagcatgatgttttatttttg
ctttctatacgcccttcatttgagccattgagcacagaggaagcttctaaggcaactgta
cctcaacggcttgggcttcagtgtgtacgtggatgtgaagtaatagagattcgagacgag
gatggaggcctgatgaatgattttactgggagaatcaaacgtgatgagtggaagcctccc
aagggtgagttgagaacagtaactgttgctctagatgcagcccagtaccacatggatgtt
acagatattgcagagaaaggagctgaagatgtgtacggaacttttaatgtgttgatgcgg
agaaaaccaaaggaaaacaatttcaaggcaattctagaatctattcgagatcttatgaat
gaaacttgtatagttcctgattggttgcacaacatatttctgggttatggaaatccttca
gccgctcagtggactaacatgcctgaccttttggagactgtagattttaaggatactttt
ctggatgcagatcatttgaaagacagttttccaaactatcagatttctttcttaaatcca
gatggctcagaaaacctgcttccagagcctccatttcgaattaaacttccaaagacgctg
aaaagcaatgcgcaagctcttcctggcaataaatctaatttaagtgcctccaatgatgct
agtacaatccaagaaagacttgttgttgagacatatattcctcctaatccaggtccatat
ccccaagacaagccaaaactgaatgcagtgagatttacccctactcagacgggggcaatt
atttctggtgttcagccaggcttgacaatggtggtaggtccacctggtactggaaagact
gatactgctgtgcagatcctgaatgttctttatcacaactgtccttcccagagaacacta
attataacacactccaatcaggctctgaatgatctttttgaaaagataatggagagagat
gtgcccgctcgatatctgcttcgattaggacaaggtgagcaggagttagcaactgatctg
gactttagtcgtcaaggccgagtaaatgcaatgctggtgcgacgtttggaactgcttagt
gaggtggagaggctagcgcgatctcttcagcttccggaggatgtaggttatacttgtgaa
acggctggttacttttggttgcttcatgtttactcacggtgggagcaatttcttgctgcc
tgcgctgataatgaagataaaccaacatttgttcaagaccgtttcccctttaaagagttc
ttttctgatgcccctcagccaatctttaccggagagtccttcgataaggatatgcgggct
gcgaaagggtgttttcgccatctcaaaactgtgtttcaggaacttgaagagtgtagggca
tttgagctgcttaaatcaaccgcagatagagcaaactacctaatgactaaacaggcaaag
attgttgctatgacttgcacacatgctgctctcaagaggaaggactttcttcaattagga
ttcaaatatgacaacctgttgatggaagagagtgcacaaatcttggaaattgagactttt
attccgatgttgctgcagagacaggaagatggttatgcacgtcttaaacgttgtatatta
attggtgatcatcaccaattgcctcctgttgtaaagaacatggcctttcagaagtacagc
cacatggatcagagtctctttactaggtttgttcgtctaggcattccatatattgagctt
aatgcccagggtcgagctcgaccaagcatagccgaactttataactggaggtatagagag
ttgggagaccttccctatgtaaagcaagaaactattttccagagagcaaatgctggattt
tcttatgattatcagttagtggatgtgccagattacaatgatagaggtgaaagtgctcct
tcaccttggttctatcagaatgagggagaggctgaatacattgttagtgtttacatgtac
atgcgcttactgggttatcctgcgaataagatatccattctaactacttacaacggccag
aaatttctcatccgtgatgttatcaaaaggagatgcgttccatacgacattattggccct
ccaaacaaggtcacaacagtggataagtttcaaggtcagcagaacgactttatcttattg
tcgctggtgcgtagccgttttgttggtcacttgcgtgacgtgagaagattggttgttgca
atgtctcgtgcaagacttggcctctatgtcttctgccgtcgttcgttatttgagcagtgc
tacgaactacaacccacctttcagcgtcttcttcagagacctgaccaccttgcactaaac
ttgatggagaatatgcctttcacagatcgtcgtgttgagaacacggagccagcctatctt
gtcaacggtgtggaggagatggctaatatcgtgaactcaaaaatgcatcaggttaaccag
gcaaggatgatgattcagcaatatggtacgaatcatattggacaaggagatgtttctgtg
gtcaaatctttccacggtggccagcaggacttgacctcagtgaatggtatggacactgaa
agacctgtcctggaaaatggtgaaccagggcaggtaccacctggtagtaattctgaggaa
ggtgctgatatggaggaagataaaactggtcaaaacggagatgcgcaagtagagaatcat
ggggagcataaaacagattctaaagttttagcagatggtggtgaggatctatctgtcaat
atggaggaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (56)   

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