KEGG   Beta vulgaris (sugar beet): 104893176
Entry
104893176         CDS       T03548                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8-like
  KO
K21343  ubiquitin carboxyl-terminal hydrolase 15 [EC:3.4.19.12]
Organism
bvg  Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:bvg00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:bvg01002]
    104893176
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bvg04131]
    104893176
   04121 Ubiquitin system [BR:bvg04121]
    104893176
Enzymes [BR:bvg01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     104893176
Peptidases and inhibitors [BR:bvg01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   104893176
Membrane trafficking [BR:bvg04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    104893176
Ubiquitin system [BR:bvg04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    104893176
SSDB
Motif
Pfam: UCH UCH_1 USP7_C2 Zn_ribbon_SprT
Other DBs
NCBI-GeneID: 104893176
NCBI-ProteinID: XP_010677561
Position
5:20632460..20648800
AA seq 972 aa
MDDNFYLDDFLPVDLDDDYDASHALRRRRRRLSSPPLSLHHDRLFLVSYQWWNDASKECW
CGKGENNGVLYSVSSHDSDEDKREYDSYEDDILSDDDKRECDSGEDDILSDEDKIKRECN
SGEDDGLSDEDKIKRECDFGEDDVLSDEDDRECDSGEDDIFSYEDDILLNLKREVDNDNI
DKGEGFSGREYALISETMWFKALKWHSDSWTRFKDVDCSLAAEGNNHDVFPIQIRLSAMQ
QTNSLAVKISLMDNPVQLYKRAYQIFDVQSDLVRIWDFSGQMAQFFVRDGVTFPNGFHGQ
ATEEVVLELQVYGFLTFGGDTVERTSEIARQGSSSRGGSCSSSSTQMNRTDESQSSSAFH
SLQSCARGYGETGMLGLTGLLNLGNTCFMNSAVQCLVHTPKLVDYFLGDYKKEINYENPL
GKQGELALAFGDLLRKLWAPSEIAVDPEFFKSTLEDFAPQFCGYNQHDSQEFLAFLLDGL
HEDLNRVKLKSYIQVGDSEGFPDENMAYEYWRSHLARNDSIIVDTFHGQFRSTLVCPFCK
RVSVTFDPFMYLSLPLPSTTVRSLTVTLLSTDGSMPPSPLTVTVPKSGRCKDLTQALSTA
ASLRDDETLFVAEVFDHRILRSLEDPSDSLALIRDHDCLVAYRLPKETESSRLVVFMHQK
AERKFGFRMARQCWSLFGIPLVARIHNILDGSQIYDAYMKLLRPFLNMEEDYNDAENLDD
ELAKMESRSLSNSDNLWSSDDDLGADLHVASEFQFHFTDERGRLKDQRIKLGKSLDLTDA
AKKWNVLVSWSHQMVRRYDTSGFSVLPEVFKPGLLSMRPQESVSLGKCLEGFLKEEPLGP
KDMWYCPSCKQHRPASKKLDLWRLPEILVVHLKRFSYSRILKNKLETYVDFPIDNLDLTG
FLAHESGPGLNCYRLYAICNHYGGMGGGHYTALVYHVKRWYEFNDRLVEQVREENIRTAA
AYVLFYRRISDT
NT seq 2919 nt   +upstreamnt  +downstreamnt
atggatgacaacttctatctcgacgactttctccccgtcgatttggacgatgattacgac
gcttctcacgctcttcgtcgtcgccgccgccgcctttcttccccccctctctctcttcac
catgatcgtctcttcctcgtctcctaccagtggtggaatgatgcgagtaaggagtgttgg
tgtggtaagggtgaaaataatggtgttctttattcggtgtcgtctcatgattctgatgag
gataagagggaatatgattcttatgaggatgacattctttctgatgatgataagagagag
tgtgattctggtgaggatgacattctttctgatgaagataagattaagagagagtgtaat
tctggtgaggatgacggtctttctgatgaggataagattaagagggagtgtgattttggt
gaggatgacgttctttctgatgaggatgacagggagtgtgattctggtgaggatgacatt
ttttcttatgaggatgacattcttttgaatctcaagagagaagtggacaatgataatatt
gataagggcgagggtttttcgggccgagaatacgctttgatttcggaaaccatgtggttt
aaggcgctaaaatggcatagtgattcttggacaagatttaaggatgtggactgttctttg
gctgcagaaggtaataatcatgatgttttccccattcagataaggctttctgcaatgcag
cagaccaattctctggcggtgaaaatatctttgatggataacccggtccagctttataaa
agagcctaccaaatatttgatgtgcagtctgacttggttcgtatatgggacttctctgga
cagatggcccagttcttcgtgagagatggtgttacgtttccgaatggctttcatggccaa
gcgactgaagaggttgtccttgagttacaagtatatggatttctcacttttggcggagac
acagtagaaaggacgtctgaaattgcaaggcaaggaagttccagcaggggaggttcatgt
agcagctcatctacccagatgaacagaactgatgaaagtcagagctcctcagcttttcac
agtttgcaatcatgtgctcgaggatatggtgaaactggtatgctgggtttaacgggactt
ctaaatcttgggaatacctgcttcatgaatagtgctgttcaatgcttagttcacactcca
aagcttgttgattatttcctaggagattacaagaaagaaataaattacgaaaatccttta
ggcaagcaaggtgagcttgctttggcctttggggatttgttaaggaagttgtgggctccc
agtgaaatagctgttgatccagaattctttaaatcaactctagaggactttgctccccaa
ttctgtggctataaccaacatgattcccaggaattcctggcttttctattggatgggctc
cacgaagacttgaaccgtgtgaaacttaagtcatatattcaagttggtgactcagagggc
tttccggatgaaaatatggcttatgaatattggcggagtcacctagctcgcaatgactcc
ataatagttgatacgttccatgggcaatttcgatctacattggtttgtcctttctgcaaa
agggtgtctgtcacgtttgatccattcatgtacctgtctcttcctttgccttcaacgact
gtgcgatccttgactgttactcttttgagcactgatggaagtatgcctccttcaccactt
accgtgacggtacccaagtctggaaggtgcaaggatcttactcaagcgttaagtacagcc
gcttcattgcgagatgatgagaccctctttgtggctgaggtgtttgatcatcgcatcctc
cgctccctggaagatccatctgattcattggcattgataagggatcatgattgccttgtt
gcttatcgcttaccaaaagagactgagagtagccggctagtggttttcatgcatcagaag
gctgaaaggaaatttggttttcgaatggcaagacaatgctggagtctatttggcattcct
ttggtggcgaggattcataatatcttagatggatctcagatttatgatgcatacatgaaa
ctgcttcgtcctttcctgaatatggaggaagattataatgatgctgaaaatcttgatgat
gagcttgctaagatggagtcaaggagtttgtcaaattcagacaatttatggagctcggat
gatgatttgggagctgatttgcatgtggcatctgaatttcagtttcattttacagatgag
cgaggtagattgaaggatcagaggataaagttgggaaaatctctggatcttacggatgca
gctaagaaatggaatgttctagttagctggtctcatcaaatggtgagaaggtatgatacc
tctggtttcagcgtgttgccggaggttttcaaacctggtttactttctatgcggcctcaa
gagtcagtttccttgggcaagtgtctggaaggcttcttgaaggaggagccattgggccca
aaagatatgtggtattgccctagctgcaagcaacatcgcccagcgagtaagaaattggat
ctttggagactgcctgaaattttggttgttcacctgaagagattctcctacagtcgtatt
ttgaaaaacaagcttgagacatatgttgattttcccattgacaaccttgatttgacaggt
ttcctggcccatgagagtggccctggtttgaattgttataggctgtatgccatctgtaac
cactatggcggcatgggaggtggtcactatacagctctggtttatcacgttaaaaggtgg
tatgaattcaatgatagacttgttgaacaggttagagaagagaacataagaacagctgcc
gcttatgttcttttctatcgcagaatctccgacacctaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (46)   

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