KEGG   Beta vulgaris (sugar beet): 104893579
Entry
104893579         CDS       T03548                                 
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1
  KO
K11866  STAM-binding protein [EC:3.4.19.12]
Organism
bvg  Beta vulgaris (sugar beet)
Pathway
bvg04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:bvg00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    104893579
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:bvg01002]
    104893579
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bvg04131]
    104893579
   04121 Ubiquitin system [BR:bvg04121]
    104893579
Enzymes [BR:bvg01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     104893579
Peptidases and inhibitors [BR:bvg01002]
 Metallo peptidases
  Family M67
   104893579
Membrane trafficking [BR:bvg04131]
 Endosome - Lysosome transport
  Others
   Others
    104893579
Ubiquitin system [BR:bvg04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    104893579
SSDB
Motif
Pfam: JAB USP8_dimer Prok-JAB DUF5934
Other DBs
NCBI-GeneID: 104893579
NCBI-ProteinID: XP_010678011
Position
5:29521968..29532646
AA seq 515 aa
MRPPSARIDIAANAQKLDVDNRISLRIYCRIADNILRQATIFRNEKNILDLYVMLLRFSS
LVSETIPRHREYAASPQSKKSLLKKQLLIALNELEALKPAVKQKVEELEIKPMYQAIGWN
YNDRPKEIHSLNSSVQWPPIKTHSPSNNQVVNATQNLSSRGIYGGSNAPQNAVSVEERFQ
RLSTTIPRPKEETLLRHSILGPSGLYGQWQPPVTGRGVRYPSNIDTSPVEIPRLQQVMAV
EDGVAGRKDLSTLDCEKPSVQPTLEPRSDIQKPQDDEKPMISFEMSDAPDTIIVKQPSPP
AMLAEVQDLIPVGQPLVTEKHDKLDSHLQNSLLQPESPMELHISTSMMDTFLRLAKSNTS
KNLETCGILAGSLKNRKFYITALIIPKQESTSDTCQATNEEEIFEVQDKHSLFPLGWIHT
HPTQSCFMSSVDIHTHYSYQVMLPEAVAIVMAPKDRTKTHGIFRLTTPGGMSVIRHCDRR
GFHSHEQPADGGPIYKQCTDVYMNPKLKFDVIDLR
NT seq 1548 nt   +upstreamnt  +downstreamnt
atgaggccgccttctgctcgtattgacattgctgccaacgctcaaaaactggatgtcgat
aatcggatttcactccgtatctactgcaggatcgccgacaatatactccgccaggctact
atcttccggaacgagaagaatattttagacctgtatgttatgcttctgagattttcaagt
ttggtatctgagactatcccacgccatcgagaatatgcagcatctccacaaagcaaaaaa
agtttactgaaaaagcaattgctaattgcgttgaatgaattggaggcactgaagccagcc
gttaagcagaaggttgaagaactagaaataaaacccatgtaccaagctattggatggaac
tataatgatcgtccaaaggaaattcattcacttaattcttctgtgcaatggcctcccatc
aaaacacactctccatctaataaccaagtagttaatgcaacacaaaatctttcttctagg
ggtatctatggaggttcaaatgctccccagaatgccgtctctgtagaagagagatttcag
agattatctactaccatccctcgtccaaaggaggagacacttttgagacattcaattttg
ggacccagtgggctctacgggcagtggcaaccacctgtcactggtagaggggtccgatac
cccagtaatattgatacgagtcctgttgaaattccaaggctccaacaggtcatggctgtt
gaagatggagtagcaggtagaaaagatctgagcaccttggattgtgaaaaaccaagtgtg
caacctacacttgaacctagaagtgatattcagaagccacaagatgacgagaagccaatg
atttcctttgaaatgtctgatgctcctgatacaataattgtcaagcaacctagccccccg
gcaatgcttgctgaggtgcaagacctaatacctgtagggcaacctctagtgactgagaag
cacgataaattggatagtcatttgcaaaatagtctgcttcagccagaatctccgatggag
ctgcacatttcaacaagtatgatggatacatttctgagactggctaaatcgaacacctcg
aaaaatctggagacatgtggtattcttgccggctcacttaagaacagaaagttctatatt
actgctttgataattccaaagcaggaatcaacatccgatacttgtcaggcaacaaatgag
gaggagatatttgaagtgcaagacaaacattcgctgtttccactgggatggattcatact
catcctacacaatcttgcttcatgtcatcggtggacattcatacgcattactcatatcag
gttatgttgcctgaagctgttgcaattgttatggcaccaaaagatagaaccaaaactcat
ggcatattccggttgacaacccctggaggcatgtcagtcataagacattgtgaccggcgt
ggatttcattcacatgagcagcctgctgatggtgggcctatatacaaacaatgtacagat
gtatacatgaatcctaagttgaagtttgatgttatagatcttagatga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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