KEGG T03548: 104898036

Beta vulgaris (sugar beet): 104898036

Entry

104898036         CDS       T03548

Name

(RefSeq) paired amphipathic helix protein Sin3-like 3

K11644

paired amphipathic helix protein Sin3a

Organism

bvg Beta vulgaris (sugar beet)

Brite

KEGG Orthology (KO) [BR:bvg00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bvg03036]
    104898036
Chromosome and associated proteins [BR:bvg03036]
Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     104898036
    REST complex
     104898036
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    104898036

SSDB

Motif

Pfam:

PAH Sin3a_C Sin3_corepress TPPII_C

Other DBs

NCBI-GeneID:

104898036

NCBI-ProteinID:

XP_010683340

Position

6:complement(60705240..60714721)

AA seq 1382 aa
MKRSRDDVYTGPQVKRPQLANSYRGETSGQPQMVGSGGTGAPTTQKLTTNDALAYLKAVK
EMFQDKKEKYDEFLEVMKDFKAQRIDTTGVIARVKELFKGHRDLILGFNTFLPKGYEITL
PPEDDNPPSKKPVEFEEAINFVNKIKLRFQGDDRVYKSFLDILNMYRKENKTISEVYQEV
AALFRDHRDLLDEFTHFLPDTSAATPGQNGPSAKNPLLRDRTSAMLTTRPAHVDRKDHEF
NVDGSDADNDKMVKAERDSRRRLDKERDKRDGFNRGQDSVADQGAENYEQHGVSDPYDDK
SALKSMYSQEFAFCEKVKEKLHNPDDYQEFLKCLHIYSREIITRQELQALVRDILGKYQD
LMDGFDEFLTRCEKIDGFLGSVMSKKSLWPESLWSEGPSKSVKAEDRERGEIGREDRDRD
RESRERDRTDRSGIYGNKEVANLRMSSNSNKDKYIGKPIQELDLSNCERCTPSYRLLPKN
YPIPLASHRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLE
SVNVTIKRVEDLLDKINSNIIKTEIPIRIEDHFTPINLRCIERLYGDHGLDVMDVLRKNA
ILALPVILTRLKQKQEEWARCRADFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKSLSTKA
LLAEVKEISEQKCQEDDVLFAIAAGNRRPIIPHMEFDYPDAELHEDLYQLMKYSCGEVCT
AEQLDKVMKIWTGFLEPIFGVPARAQGAEDSEEVIRAKNETAKAEGPAIGENDRSASGCA
ATRKHESSPPEQSSSGNHAKDDGFPDASSSALHQVRAQSNGNTAEQISGLGKQTTANERL
PASHAFLPSGAEQFHGRNTENPSGHSTTPLRVGNAGDNSGLESRSNGGNKPAEAVDSTRP
VPALNGAITGANKEIRYCEETNGHSKVEREEGELSPNGDFEEDNFAVFGNAATEPENKPN
DGASSAPRQSRQRGEVHHSGARGDNDADADDEGEESAHRSSEDSENASENGDVSPSESGE
GEDCSPEHEEDGEHDENDNKAESEGEAEGMADAQEDGDGTSLPLSERFLQTVKPLAKHVP
TSVNERKKISRIFYGNDSFYVLFRLHQTLYERIQSAKINSSTADRKWKSSHEAVPSDLYS
RFMNALYSLVDGTSDNTKFEDDCRAIVGTQSYLLFTLDKLIYKLVKQLQILATDEVDSKL
LQLFAYESSRKFDRFLDVVYHENARVLLHDENIYRIECSSSPSRLSIQLMEKGHQKPEVT
AVSMEPNFSAYLHNEFLSVVPETKEKPGIFLKSRNKRPYTSGDEISSASEAMEGVQVVNG
LECKIACNSSKVSYVLDTEDFLYRRIRNRRTLRVSSACNDQAKSRNGSSRRLDPFSRLLA
SS

NT seq 4149 nt +upstreamnt +downstreamnt
atgaagaggtctagagatgatgtttacacagggcctcaagttaaacgccctcaacttgct
aattcgtatcgcggcgagacttctggtcagcctcagatggttggaagtggtgggactggt
gcgcccacaacgcagaaactaacgaccaatgatgccctagcttatctgaaggcagtgaag
gaaatgtttcaagacaagaaggagaaatatgatgaatttttagaagttatgaaggatttc
aaagctcaaagaattgacaccacaggtgtaatagcaagagttaaagaactgttcaaaggg
catcgcgacttaatattgggatttaatacctttttgcccaagggatatgaaatcactctt
cctcctgaggatgataatccgccttcgaagaagccagttgaatttgaagaagcaattaat
tttgttaacaaaattaagttgcggtttcaaggcgatgatcgtgtttataagtcattcctt
gacattttgaacatgtataggaaagaaaacaagaccatcagtgaggtctaccaagaggta
gctgcactcttccgagaccatcgagaccttcttgatgaatttacacattttcttcctgat
acatcagcagcaacaccaggtcaaaatggtccatctgctaaaaatcctttgttgcgggac
aggacctctgccatgcttacaactaggccagcacatgttgacaggaaggatcatgagttc
aatgtcgatggttctgatgctgacaatgataaaatggtgaaagcagagcgagatagcagg
aggcggcttgataaagaaagagacaaaagggatggttttaacaggggccaagactctgtc
gcagaccagggtgctgaaaactatgaacagcatggtgtctctgatccttatgatgataag
agtgctctaaaaagtatgtacagccaagaatttgcattctgtgaaaaagtcaaggagaag
ttacataatcctgatgattatcaggaatttttgaaatgccttcacatatacagcagggag
ataatcacaagacaagaattgcaagctttggtgcgtgatatacttggaaagtaccaagat
ctcatggatggatttgatgagtttttgacacgttgtgagaaaattgatggattccttggc
agtgttatgagtaaaaaatccttgtggccagaatctctgtggagtgagggtccatcaaaa
tcagtgaaagctgaggatagggagcgaggggaaattggaagagaagacagagatagagat
cgtgagagcagggagagggatcgcactgatagaagtggtatttatggaaataaagaagtt
gccaatctcaggatgtcttcaaattcgaacaaggataagtatataggaaaacctatacaa
gagctcgacctctctaactgtgaacgctgcacacctagttatcgacttcttcccaagaat
tatcccatacctttggcaagtcacaggacagaacttggagctgaagtattgaatgatcac
tgggtctctgtcacctctggaagtgaggattattcatttaaacacatgcgtaaaaatcag
tatgaggagagcctctttcgatgtgaagatgacaggtttgaactagacatgctgttagag
tccgtgaatgttacaattaagcgtgtcgaagacctcctagacaaaatcaactccaacatt
atcaaaacagaaattcctatccggatagaggaccactttacacctattaatctacgatgc
attgaacggttatatggggaccatggtcttgatgtcatggatgtattgagaaagaatgca
atccttgcattgcctgttatattgactcgcttgaaacaaaaacaagaagagtgggccaga
tgccgtgctgatttcaataaggtgtgggctgaaatttatgctaagaattatcataaatca
ctcgatcaccgtagcttctactttaagcaacaagacacgaagagcttgagtacgaaagct
ttattggctgaggttaaagagatcagtgagcagaaatgccaagaggatgatgtgcttttt
gctattgctgctggaaacagacggcctattatcccccatatggaatttgattatccagat
gcagagttacatgaagatttgtatcaactgatgaaatactcctgtggtgaagtatgtaca
gctgaacagttggataaagtgatgaaaatctggacaggtttcttggaacccatatttggt
gtgcctgctcgagctcagggtgcagaggactctgaagaagtcataagagccaaaaacgag
actgccaaagcagagggtcctgctattggtgaaaatgatagaagtgctagtggttgtgct
gctactcgtaaacatgaaagtagtccaccagaacaatcgagttctggaaatcatgctaaa
gatgatggatttcctgatgccagcagcagtgccctgcatcaagttcgagcacaaagtaat
ggcaacacggctgaacaaatatccggtcttggcaaacagaccactgctaatgaacgatta
cctgcttctcatgcgttccttccctctggagctgagcaatttcatggaagaaacactgaa
aatccatcaggtcatagtaccacaccattgagagtcgggaatgctggagataacagtgga
cttgagtcgagatcaaatggtggcaataaacctgcagaggctgttgattctacaaggcca
gtaccagcattgaatggagcgataacaggagccaacaaagaaattagatactgtgaagag
accaatggacattccaaagtggaaagagaagagggtgagttgtctccgaatggagatttt
gaggaggataattttgcagtttttggaaatgcagccacagagcctgaaaacaagccaaat
gacggtgcttcaagtgccccacgacaaagtagacagcgaggcgaggtacatcatagtggt
gctagaggagataatgatgcagatgctgatgatgaaggtgaggagagcgctcacaggtca
tcagaggacagtgagaatgcttcagagaatggggacgtttcccccagtgagtctggtgag
ggagaggattgttcccctgagcatgaagaagacggggaacatgatgagaatgacaacaag
gctgaaagtgagggtgaggctgaaggaatggcagatgcacaagaagatggagatggaaca
tcattacccctttctgaacgttttctacaaacagtgaagcctcttgctaagcatgtccct
acatctgtaaatgaaaggaaaaaaatttcacgcatcttttatggaaatgactcgttctat
gtgctctttagactacatcagactttgtatgagagaatacaatcagcgaagattaactca
tctacagctgatcggaaatggaaatcttcccacgaagccgttccgtctgacttgtattct
aggttcatgaatgcgctatatagtttggttgatggtacatctgacaacaccaaatttgag
gatgattgtcgtgccattgttggtacccaatcgtatcttctgttcactttagacaagctc
atatacaagctcgttaagcagcttcaaatattggccactgatgaagttgacagcaagctt
cttcaactatttgcatatgaaagctctagaaaatttgacagattcttagatgttgtttat
cacgagaatgctcgtgttctcctccatgatgagaacatataccgtatcgaatgttcatct
tcaccatctcgcttgtccattcaattaatggagaaagggcatcaaaaacctgaagtgaca
gcggtttcaatggaacccaatttttcagcctatctacataatgagttcctctcagttgtc
cctgagacgaaagagaagcctgggatttttttaaagagcaggaataaacgcccatatacg
agtggagatgaaatctctagtgcttctgaggctatggaaggagttcaagttgtcaatggt
ttagagtgcaagatagcttgcaattcgtccaaggtgtcttatgtattagatacggaagat
ttcttataccggaggataagaaataggagaactttgcgtgtgagcagtgcttgcaatgac
caggcgaagtcacgaaatggctcttctcgcagattagatccgtttagcagattgcttgcg
agctcatga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (53)   

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