KEGG T03548: 104901823

Beta vulgaris (sugar beet): 104901823

Entry

104901823         CDS       T03548

Name

(RefSeq) dicer-like protein 4

K11592

endoribonuclease Dicer [EC:3.1.26.-]

Organism

bvg Beta vulgaris (sugar beet)

Brite

KEGG Orthology (KO) [BR:bvg00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bvg03036]
    104901823
Chromosome and associated proteins [BR:bvg03036]
Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    104901823
   microRNA pathway
    RISC loading complex
     104901823

SSDB

Motif

Pfam:

Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer DEAD Helicase_C ResIII dsrm DND1_DSRM PAZ Dicer_dsRBD DUF6240

Other DBs

NCBI-GeneID:

104901823

NCBI-ProteinID:

XP_010687747

Position

8:complement(30949974..30969361)

AA seq 1629 aa
MGDYTPILDTQVEMGITSIPPISKQNPKTIARKYQLELARKAFEENVIVVLETGCGKTLI
AILLMCDMAHLINNPLKNVCVFLAPTVVLVRQQARVIEQFTDFNVGVYSGDDAKHLKTHV
AWERELEQYEVLVMTPQVLLRSLCHCFIKMERIALLIFDECHYAQKESNHPYAEIMKVFY
DMKVAQVPRIFGMTASPICGKGASINSLQALLHAKVYTVNDKRELETVVVSPVVEVYYYS
AKEKLLNSHKKCSDKLEEIKRQCTSVLYRTGDDPSRVQNTKKLLQRLHNNMVFSLTSLGL
WGALQACHILLNGDGWERNELIDAKGNSSDDFLQNEYLTQTACLLDMECKNDVAEGTTDM
LCNNLLREPFFSQKVLRLVGILSNFRSRPDMKCIIFVNRIIVARSLAYILGKIKVLSAWK
CNYLVGVHSKRMSRNTMYQILEEFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETLA
SFIQSRGRARMPQSEYAFLVDSENEREMNLMDSFRKEEDLMNMDIRDRKPNGVIADFNEE
VYSVDSTGATISAQSSVSLLYHYCSKLPHDEYYNPTPEVFNVDDTEGTICHIILPSNAPI
HHIVSAPQSSMEAAKKDACLRACKELHQVGALTEYLLPEQDNVREEANLDSSESDSTEDE
DSPFELQEMVVPAALKEPWSDVDTCVCLNSYFIRFKPEPHDRLYKEFGLFVKSPLPCEAE
RMKVDLHLAHGRSVLTDLVPSGVSEFKKQEMLLALNFQEMCLKIILDRSEFMCGHVPLKN
NKVSESNSSIFYLVLPVIPQECGKSISVDWMVIRRCLSSPIFAPHGHLVGTRITLDSCLQ
LADGPASVNDILNSLIYVSYKKSFFFVSQILPDKNGFSLHNSSRSHIEHLSGSFGIHLAH
PGQPLLQAKQLFCLHNLLHDRKKGNPGSRELDEHFFELPPELCEIKIIGFSKDLGSSLSL
LPSIMHRLENVLVAIELKDILSKSFAEGTVVTAERVLEALTTEQCHERFSLERLEVLGDA
FLKFAVGRHLFLKHETFDEGQLTRRRSNLVNNSNLCKLAIKNKLQGYIRDQEFDPGQFFA
LGRPCSIICTKQTESLIHCDSEVNLRNGIDNRQLRCSKNHHWLTKKTIADVVEALIGAYI
VDSGFKAAIAFLRWFGIQVEFEVSQVCRAWTASSRFMSLANQINIPDIEGIAGHRFVHKG
VVLQAFVHPSYNRHGGGCYQRLEFLGDAVLDYLITSYLYTVFPELKPGQLTDLRSSLVNN
SSFAQVAASGLYKYILCENNNLCAAIDKYVNFIRKPASERHLLEEPPCPKALGDLVESCI
GAILLDTGFDLNHVWKVMLSFLNPTMRFSNLQLSPIRELLELCQYHGWDSKFIPSKRNRS
FMVEAIVDGKSFASATYRSIKGAKKMAAQQATQKLKAQGHRLKTKSLEEVLKTLRKMEAR
LVGYDEIPFSLVSSSEMATVGNLSLEDLSNNCVNPAKLSFGNLTLNDDPISSACVSPDHN
MYEVPTVISNFQKKIRKAPISSFKRQQHSRRDGDNNCSIDSDVHGKATARSRLHEICVKN
CWRHPVYECCKEEGPSHLKLFTFKVVVLIEEAEDVTMECFGRPQVKKKAAAEEAAEGAIW
FLKKEGYMK

NT seq 4890 nt +upstreamnt +downstreamnt
atgggcgattatactcctattcttgatactcaagttgaaatgggaatcacttcaattcct
ccaatttctaagcaaaacccaaaaaccattgctagaaagtatcagttagaattggcaaga
aaagcatttgaggagaatgtgattgtggttttagagactggttgtggaaagaccctaatt
gctatattgttaatgtgtgatatggctcatttgatcaataatccactaaagaatgtttgt
gttttcttggctcctactgtggttttagttcgtcagcaagctagggttattgaacaattc
actgattttaatgttggagtttactcgggcgatgatgctaagcatttgaagactcatgtt
gcttgggaaagagagcttgagcaatatgaggttcttgttatgactccacaagttttgttg
cgtagtttatgccattgcttcatcaagatggagagaattgctctcttaatatttgatgag
tgtcattatgcacaaaaagagagcaatcatccttacgcagagatcatgaaagtcttctat
gatatgaaagttgctcaagttccccgtatctttggcatgactgcatctcccatatgcggg
aaaggtgcttctatcaatagtcttcaagctttgcttcatgctaaggtttatactgttaat
gacaagagagagctggaaacagttgttgtatctcctgtggtcgaagtgtactactatagt
gcaaaagaaaaattgttgaattcgcacaagaagtgttctgataaacttgaggagatcaaa
cgtcagtgtacatctgtgctttacaggacgggagatgatccctctagagtacagaacacc
aagaaacttctgcaaagactacataacaacatggtgttttctctaactagccttggcctt
tggggagcgttgcaagcctgtcacatccttctgaatggtgatggctgggagagaaatgag
ctgatagatgcaaaaggaaactccagtgacgacttcttacaaaatgagtatcttactcag
actgcatgtctactggacatggaatgtaagaacgatgttgctgaaggaacgactgatatg
ttgtgtaacaatcttctaagggagccttttttctcacaaaaggttctgcgtcttgttgga
atcttgtcaaactttaggtcaaggccagatatgaaatgtataattttcgtgaataggatt
attgttgccagatctttggcatatatccttggaaaaattaaggttttatctgcttggaag
tgcaattacctggttggagttcactccaagcgtatgtccagaaataccatgtatcagatt
ctggaagaattccggtctggcgagctgaatctgttggttgctactaaagttggtgaagaa
ggacttgatattcagacatgctgccttgtaatacggtttgatcttcctgaaactttggct
agctttatacagtccagaggccgtgcaagaatgcctcagtcagaatatgcttttttagtt
gacagtgaaaacgagagagagatgaatttgatggacagtttcagaaaagaggaggatctt
atgaacatggatattagagacagaaaacccaatggagttattgccgatttcaacgaagaa
gtttattccgtggactccactggtgctaccattagtgctcaaagtagtgtttcgttgctc
taccattactgttcgaaactgccacatgatgagtattataaccccacgccagaagtattt
aatgttgatgatacagaaggaaccatatgccacattattcttccttctaatgctcctatt
catcacatagtgagtgcgccccagtcgtcaatggaagcagcgaagaaagatgcttgtcta
agggcatgcaaagagttgcatcaagttggtgctttgactgagtatctgttgccggaacag
gacaatgtaagggaagaggctaacctcgatagttctgaatctgatagcactgaagacgaa
gattcaccatttgagttgcaggagatggtagttcctgctgcactgaaggaaccgtggtct
gatgtggatacctgtgtttgtctcaattcctactttataaggtttaaacctgaaccacat
gatagactgtataaagaatttggcctttttgtaaaatcacctctgccttgtgaggctgag
cgaatgaaggttgatcttcatctcgcccatggtagatctgtgttgactgatctggttccc
tctggagtttctgaatttaaaaaacaagagatgctgctggctctgaatttccaggaaatg
tgccttaagatcattcttgatcgttcagaatttatgtgtggtcatgttcccctcaagaat
aataaagttagtgaatcaaattcatccatattctatctggtgctccctgtcattccacaa
gagtgcggcaaatcgatatctgtggattggatggtcattagaaggtgcttgtcatcgccg
atatttgcccctcatggtcatttagtgggtactcggattactctagatagttgtttgcag
cttgctgatggacctgccagtgtaaatgatattttgaatagcttaatttatgtttcctac
aagaaatcattcttctttgtttcccaaattctccctgacaagaatgggtttagtctccac
aacagttctagaagccatatagagcacttgagtggaagctttgggattcatctagcacac
ccaggacaacctctactacaagctaaacagctcttttgcttacacaatttgttgcatgac
agaaagaaaggaaatccagggtcacgtgaactagatgaacacttcttcgaactaccacct
gagttgtgtgaaataaagataatcggattttccaaggacttggggagctcattgtctctg
ttgccatctatcatgcatcgcctggaaaacgtgcttgtagcaattgaactgaaggatata
ttgtccaagtcatttgctgagggaacagtggttacggctgaacgtgttcttgaagcattg
actaccgaacaatgccacgagcgcttttcccttgagaggctagaagttcttggtgatgct
tttctcaagtttgcagtggggcgacatctctttcttaagcatgaaacttttgacgaaggg
cagttgactaggaggcgttcaaatctagtaaacaactcgaacttatgcaagctggctatt
aagaataaattacagggatacatacgtgatcaagaatttgaccctggccaattttttgct
cttggtcgtccttgctcaatcatatgtaccaagcagacggaaagtttaattcattgtgac
tctgaagttaatctgagaaatgggattgataatcgtcaactgagatgcagcaaaaatcat
cattggttaaccaagaaaacaattgcagatgtagttgaagcactaattggagcttacatt
gttgacagtggttttaaagcagcaattgcattccttagatggtttggtatacaagttgaa
tttgaagtttctcaagtttgtcgtgcatggactgcaagttccaggtttatgtcacttgca
aaccaaattaatatcccagatattgaaggtattgcgggtcatcgttttgttcacaaaggc
gtagttctacaagcatttgtacatccctcgtacaatcgacatggaggaggttgctaccag
agattggagtttcttggtgatgctgtgttagattacttgatcacttcctatctatatacc
gtgttccctgagctgaaacctggccagttgactgatttaagatcatcccttgtgaacaac
agctcgtttgctcaagtagccgctagtggattgtacaaatatattttatgtgagaataac
aacctatgtgctgctatcgataagtatgtgaacttcatcagaaagcctgcttcagaaagg
catctactcgaggagccaccatgcccgaaggctctcggtgacttggttgaatcttgtatt
ggtgcaattcttcttgacacaggatttgacttgaatcatgtgtggaaggtgatgctctcg
tttctaaaccctaccatgagattttctaatttgcagcttagtcctattagagagctgttg
gagctatgccaatatcatggctgggattcaaaatttatcccttctaaaagaaatagaagt
ttcatggttgaggcaatagtggatggaaagagttttgcctctgctacataccgtagcatt
aaaggtgcaaagaaaatggctgcgcagcaagcaactcaaaagctgaaggctcagggtcac
agactgaagactaaatcactggaggaagtccttaaaactctgcgaaagatggaagccagg
ctggttggatatgatgagataccattttccctagtttcttccagcgaaatggctactgtt
ggaaatttgagtttggaggatctttctaataattgtgtgaacccagcaaaactctccttt
ggaaacttgactttgaacgatgatcccatttccagtgcttgtgtgagtcccgaccacaac
atgtatgaagtcccgacagttatctctaattttcagaaaaaaatcagaaaagcacccatt
tcttcgtttaaaagacagcagcatagtcggcgtgatggggataataactgtagcattgac
tcagatgtgcatgggaaagcaacagcaagatcacgattacatgagatatgtgttaaaaac
tgctggagacaccccgtttatgagtgctgtaaagaggaaggaccgagccatttgaaacta
ttcactttcaaggtagtggtgctaatcgaggaagccgaagatgtgacaatggagtgcttt
ggtcgaccccaagtcaaaaagaaagcggcggcagaagaggcagcagaaggtgcaatttgg
ttcttgaagaaggaaggctacatgaagtaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (56)   

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