KEGG   Burkholderia vietnamiensis G4: Bcep1808_2896
Entry
Bcep1808_2896     CDS       T00493                                 
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN/SigL
  KO
K03092  RNA polymerase sigma-54 factor
Organism
bvi  Burkholderia vietnamiensis G4
Pathway
bvi02020  Two-component system
bvi02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:bvi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Bcep1808_2896
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Bcep1808_2896
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bvi03021]
    Bcep1808_2896
Transcription machinery [BR:bvi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Bcep1808_2896
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_38 HTH_Crp_2 HTH_23 TRF
Other DBs
NCBI-ProteinID: ABO55887
UniProt: A4JHY4
Position
1:3209312..3210817
AA seq 501 aa
MKASLQLRLSQHLALTPQLQQSIRLLQLSTLELQQEVAMAVAQNPLLESDDEWIASPLRV
AADGSLIAQTPPAPNGESGSMNGSGQSSERAERDEPAATDEYDGYGSGDASDGPQWNLDE
FGRSSGASDDDDLPPLQVQEAATSLREHLSAQLRVTQASPRDRALVMFLIESLDDDGYLT
ASLDEVLADLPPELEVDCDELNAALALLHSFDPAGVGARSASECLKLQLLRLDPSPTRTL
ALEIVSQHLELLAARDFTRLRKQLKASDDALRDAHALIRSLEPFPGAAYGKAEADYVVPD
IIVKKAGQGWLAELNPEVMPRLRINNLYANILRNSRGDPSTGSLKQQLQEARWLIKNIQQ
RFDTILRVAQAIVERQKNFFAHGEIAMRPLVLREIADTLGLHESTVSRVTTGKYMLTPFG
TLEFKYFFGSHVSTDTGGAASSTAIRALIKQLIGAEDPKSPLSDSRIAELLAEQGFVVAR
RTVAKYREALRIPAVNLRKSL
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgaaagccagcctccaactccgcctgtcgcaacaccttgcgttgacgccgcagctgcag
cagtcgattcggcttttgcagctgtcgacgctcgagctgcagcaggaagtcgcgatggcc
gtcgcgcagaatccgctgctggaaagcgacgacgaatggatcgcgagcccgctgcgcgtc
gcagccgacggatcgctgatcgcgcagacgccgcccgccccgaacggcgagtccggcagc
atgaacggcagcggccagtcgagcgagcgcgccgaacgcgacgagccggccgccaccgac
gaatacgacggctatggctcgggcgacgcgagcgatggcccgcaatggaatctcgacgaa
ttcggccgctcgagcggcgcgtcggacgacgacgatctcccgccgctgcaggtgcaggaa
gccgccacgtcgctgcgcgagcatctgtccgcgcagctgcgcgtcacgcaggccagtccg
cgcgatcgcgcgctcgtaatgttcctgatcgaatcgctcgacgacgacggctacctgacc
gcgtcgctcgacgaagtgctggccgacctgccgcccgaactcgaagtcgactgcgacgag
ctgaatgcggcgctcgcgctgctgcacagcttcgatccggccggcgtcggcgcgcgctcg
gcgtccgaatgcctgaagctgcaactgctgcggctcgatccgtccccgacccgcacgctc
gcgctggaaatcgtctcgcagcatctcgagctgctcgccgcgcgcgacttcacgcggctg
cgcaagcaactgaaggcgagcgacgacgcgctgcgcgacgcgcacgcgctgatccgctcg
ctggagccgttccccggcgcggcctacggcaaggccgaggccgactacgtggtacccgac
atcatcgtgaagaaggccggccagggctggctcgcggagctcaatccggaggtgatgccg
cgcctgcggatcaacaacctgtacgcgaacattctgcgcaacagccggggcgatccgtcg
accggatcgttgaagcaacagctgcaggaagcacgctggctgatcaagaatatccagcag
cgattcgacacgatcctgcgtgtcgcacaggctattgtcgaacgtcagaagaacttcttt
gcgcacggcgaaattgccatgcgccccttggttttgcgggaaatagctgatacgctgggc
ctacacgagtcgactgtcagccgtgtgacaaccggtaagtacatgctgaccccgttcggg
acgctggagttcaagtacttcttcggatcgcacgtttcgaccgacaccggaggcgccgca
tcgtcgaccgccatccgagccctgatcaagcaactgataggagctgaagacccaaagtcg
ccactttcggacagccgcattgccgagctgctggcagaacagggattcgtggtcgcgcgc
cgcacggtcgcgaagtatcgcgaagccctcaggatcccggcagtgaatctgcgcaaatct
ctttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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