KEGG   Bartonella vinsonii subsp. berkhoffii: BVwin_00660
Entry
BVwin_00660       CDS       T02470                                 
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
bvn  Bartonella vinsonii subsp. berkhoffii
Brite
KEGG Orthology (KO) [BR:bvn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bvn03016]
    BVwin_00660 (truA)
Enzymes [BR:bvn01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     BVwin_00660 (truA)
Transfer RNA biogenesis [BR:bvn03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    BVwin_00660 (truA)
 Prokaryotic type
    BVwin_00660 (truA)
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: AGF75224
Position
complement(86375..87118)
AA seq 247 aa
MPRFKLTLEYDGSNYAGWQRQAELHTVQGTLEQAIFCFCGQQLTITTAGRTDAGVHATGQ
VAHVDFEKNWGSHTVRDALNAHLQKQGESTSILEVENVPDSFDARFSAIKRHYLFKILNR
RSPPALNAKRVWWLPKPLNAEAMHEAAQKLVGQHDFTTFRSAHCQAKSPIRTLERLDVQR
EGEEIFLYAQARSFLHHQIRSFAGSLMEVGVGRWTANDLEAALHAKDRTRCGVVAPPSGL
YLTKVEY
NT seq 744 nt   +upstreamnt  +downstreamnt
atgccccgttttaaactcactcttgaatatgatggctcaaactatgctggttggcagcgc
caagcagagttgcacaccgtacaagggactctcgaacaagccattttttgcttctgtgga
caacaattgaccatcacgacagcgggtcgaactgatgcaggtgtacacgctacgggacaa
gttgcgcatgttgattttgaaaaaaactggggctcccatactgttcgcgatgcactcaat
gcgcatttacaaaaacagggggagagtacttcgattttggaagtagaaaacgttccggat
agctttgatgcacgattttccgcaatcaaacgccattacctttttaaaattctcaatcgt
cgctctccccccgctctaaatgctaaacgtgtatggtggttgccaaaaccccttaatgct
gaagccatgcatgaagctgcccaaaaacttgtagggcaacacgattttaccacttttcgc
tctgcacattgccaagccaaaagccctattcgcactttagagcgtcttgatgttcaaaga
gaaggagaagagatctttctctatgcacaagcccgctcttttcttcatcatcaaattcgt
tcctttgcaggaagcctcatggaagtaggtgtcggacgctggacagcaaacgatcttgaa
gcagctcttcacgctaaagatcgcacacgttgtggtgttgtcgcaccgccttcaggactt
tatttgactaaagtggaatattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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