KEGG   Bartonella vinsonii subsp. berkhoffii: BVwin_12570
Entry
BVwin_12570       CDS       T02470                                 
Symbol
sigH
Name
(GenBank) RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
bvn  Bartonella vinsonii subsp. berkhoffii
Brite
KEGG Orthology (KO) [BR:bvn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bvn03021]
    BVwin_12570 (sigH)
Transcription machinery [BR:bvn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BVwin_12570 (sigH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_23 DUF134 HTH_28 GerE
Other DBs
NCBI-ProteinID: AGF76338
Position
complement(1505830..1506384)
AA seq 184 aa
MAEGVKNFKQELLLVLPALRAFALSLSGRHDKAEDLVQDTVMKAWAKQDSFEMGTNLKAW
LFTILRNEFYSQMRKRGREVQDTDGIFTQNVAVHPAQYGLLDLQDFKKALNMLSADQREA
IILIGASGFSYEDAAAICGCAVGTIKSRVSRARNRLQELLKVNGESDYGPDAHSAGSTLC
SFNG
NT seq 555 nt   +upstreamnt  +downstreamnt
atggcagagggcgtaaaaaactttaaacaagaacttcttttggttttaccagcgttgcgg
gcttttgcactttctttaagtggaagacacgataaagcggaggacttggttcaagatacc
gttatgaaggcatgggcaaagcaggacagtttcgaaatgggaacaaatctgaaagcttgg
ctttttacgattttgcgtaatgagttctatagtcaaatgcgcaaaagaggaagagaagtt
caagacactgatggcatatttacccaaaatgtagcggttcatcctgctcaatatggatta
ctcgatttgcaagatttcaaaaaagccttaaatatgctctctgctgatcaaagagaagcc
attattctcattggagcctctggcttttcttatgaagatgctgcagctatttgtggttgt
gctgtggggacaattaaaagccgtgtcagtagagcacgcaatcgcctacaagaacttctt
aaagtcaatggtgaatctgattatggtcccgatgcacattccgctggaagcacattgtgt
tcatttaacggctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (14)   

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