KEGG   Bacillus wiedmannii: CT694_27320
Entry
CT694_27320       CDS       T05831                                 
Symbol
rnr
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
bwd  Bacillus wiedmannii
Pathway
bwd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bwd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CT694_27320 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bwd03019]
    CT694_27320 (rnr)
   03016 Transfer RNA biogenesis [BR:bwd03016]
    CT694_27320 (rnr)
Enzymes [BR:bwd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     CT694_27320 (rnr)
Messenger RNA biogenesis [BR:bwd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CT694_27320 (rnr)
Transfer RNA biogenesis [BR:bwd03016]
 Prokaryotic type
  tRNA degradation factors
   CT694_27320 (rnr)
SSDB
Motif
Pfam: RNB CSD2 OB_RNB S1 OB_Dis3
Other DBs
NCBI-ProteinID: AZJ23146
Position
complement(5099226..5101664)
AA seq 812 aa
MEEIIQENIDKLLLFMREEAYKPLTIQELEEAFGIEGSEGFKDFVKALVMMEEKGLVIRT
RSNRYGLPEKMNLVRGKLIGHARGFAFVVPEEKKTGDDDLFIPPTELNGALHGDTVLARV
SAQSSGSRQEGSIVRILERGTKELVGTYTESKNFGFVVPDNKRWTSDIFILKSASMGAVE
GHKVVVKITSYPENRLSAEGEVIQILGHKNDPGVDILSVIHKHHLPLAFPEEVMEHANSV
PETISEEDLKDRRDLRDQMIVTIDGADAKDLDDAVTVTKLENGNYKLGVHIADVSHYVQE
GSPIDVEAAERATSVYLVDRVIPMIPHRLSNGICSLNPKVDRLTLSCEMEINNLGDVVKH
EIFQSVIKTTERMTYADVRSILEDEDEELIKRYEPLVPMFKEMGQLAQILREKRMRRGAI
DFDFKEAKVLVDEEGKPTDVVMRDRSVSEKLIEEFMLVANETVAEHFHWMNVPFMYRVHE
DPKEDKLERFFEFVTNFGYAVKGRANEIHPRALQQILEMVQGQPEEVVISTVMLRSMKQA
RYDADSLGHFGLSTEFYTHFTSPIRRYPDTIVHRLIREYIINGKVDNETQAKWRENLPEI
AEHSSNMERRAVEAERETDEMKKAEYMVDKIGEEYDGMISSVTNFGLFVELPNTIEGLVH
VSYLTDDYYRYDEKHFAMIGERTGNVFRIGDEITIRVINVNKDERAIDFEIVGMKGTPRR
KFKDRPVVIEQPRTGRKKRGGRSERSDERGGERGTGRKFDRGGKGKGRGSASASTSTSTS
ASQPGKKDGNGKKKKAFFENVPGFKKKKKKRK
NT seq 2439 nt   +upstreamnt  +downstreamnt
ttggaagaaatcatacaagaaaatattgataagttgttgttatttatgagagaagaagcg
tataaaccgttaacaatacaagagttagaagaggcatttggaattgaagggtctgagggc
tttaaagattttgtaaaggcacttgtaatgatggaagagaagggacttgttattcgcaca
cgtagtaaccgttacggtcttcctgaaaagatgaatttagtacgcggtaaattaattgga
catgcacgtggctttgcattcgttgtaccagaagagaagaaaacgggagatgatgatctt
ttcatcccacctacagagttaaacggtgcacttcatggcgatacagtattagcgcgtgtt
agcgcacaatcaagtggatcacgccaagaaggttcaattgtacgtattttagagcgcggc
acgaaagaactagttggtacatatacagaatcgaaaaactttggatttgttgtacctgac
aataagcgctggacgagtgatatctttatcttgaaaagtgcatcaatgggtgctgtagaa
ggccataaagtagttgtgaaaattacgagctatccagagaatcgtttaagtgcagaaggt
gaagttattcaaattctaggtcataaaaatgatccaggagtagatattttatcagttatt
cataaacatcatctacctttagcattccctgaagaagtgatggagcatgcaaacagtgta
ccagaaacgatttcagaagaagatttaaaagatcgccgtgacctgcgtgaccaaatgatt
gtaacgattgacggtgcagatgcgaaagatttagatgacgctgttacagtaacgaagctc
gagaacggtaactacaagcttggcgttcatattgcggatgtaagtcattacgttcaagaa
ggttctccaattgatgtagaagcagcggaaagagcaacgagtgtatatcttgttgaccgt
gtaattccgatgattccgcatcgtctatctaacggtatttgttcgttaaacccgaaagta
gaccgtctgacgttatcttgtgaaatggaaatcaacaacttaggtgatgttgtaaagcat
gagattttccaaagtgtgattaaaacgacagagcgtatgacgtatgctgacgtaagaagc
attttagaagatgaggacgaagagttaatcaaacgctatgagccgctcgtaccgatgttt
aaagagatgggtcaattggcgcagattttacgtgaaaaacgtatgcgccgcggtgcaatc
gactttgactttaaagaagcgaaagtattagtagatgaagaaggtaaaccgacagatgtt
gtcatgcgtgatcgttctgtatcagagaagttaattgaagaatttatgcttgttgcgaac
gaaacagtagcagagcatttccactggatgaacgtaccattcatgtaccgtgtccatgaa
gatccgaaagaagataagctggaacgtttcttcgagtttgtaacaaacttcggatatgca
gtaaaaggacgtgcgaatgaaatacatcctcgtgcgctgcaacaaattcttgaaatggtt
caaggacagcctgaagaagtagttatttcaacagtaatgcttcgttcaatgaagcaagcg
cgttacgatgcggatagcttaggacatttcggtttatcaactgagttctacacacatttc
acatcaccaattcgtcgttacccagatacaattgttcatagattaattcgtgaatacatc
attaacggtaaagtcgacaacgaaacacaagcaaaatggcgtgaaaacttacctgaaatt
gcagagcattcttctaatatggaacgccgtgcagttgaagcagaacgtgaaacagacgaa
atgaaaaaagcagagtatatggttgataaaatcggcgaagagtatgatggtatgattagc
tctgtaacaaacttcggtttattcgtagagcttccaaatacaattgaaggtcttgtacat
gttagctacttaacagatgattactaccgttatgacgagaaacatttcgcaatgatcgga
gaacgtacaggtaacgtattccgcatcggagacgaaattacaattcgcgttattaacgta
aataaagacgagcgtgcaatcgactttgaaatcgttggcatgaaaggtacgcctcgtcgt
aagttcaaagatcgtccagtcgttatcgaacagccaagaacaggcagaaagaaacgcggt
ggacgtagcgagcgcagtgatgagcgcggcggagaacgtggtacaggtagaaaattcgac
cgtggtggcaaaggaaaaggaagaggatcagcttctgcttccacttccacttccacgtcc
gctagtcagccagggaaaaaagatggtaacggtaagaagaaaaaagcattcttcgaaaat
gtaccaggattcaagaagaaaaagaaaaagcgtaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system