KEGG   Paraburkholderia xenovorans LB400: DR64_1798
Entry
DR64_1798         CDS       T03290                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
bxb  Paraburkholderia xenovorans LB400
Pathway
bxb02020  Two-component system
bxb02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:bxb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    DR64_1798 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    DR64_1798 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bxb03021]
    DR64_1798 (rpoN)
Transcription machinery [BR:bxb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     DR64_1798 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_38 HTH_23 HTH_Crp_2
Other DBs
NCBI-ProteinID: AIP32472
UniProt: Q145W1
Position
1:1972008..1973525
AA seq 505 aa
MKASLQLRLSQHLALTPQLQQSIRLLQLSTLELQQEVAMAISQNPLLENEDDWIASPLRV
AADGSLIAQAPNSSAPPDQMGGSTSSSSTSSSERAENGEPQGVDEYNGLAGDSNGDASQW
NLDDYGRSGNASDDDDLPPLQIHESSTSLRDHLMAQLRVTQASPRDRALVTFLIESLDDD
GYLAATLEEVLADLPEELEVDLDELNAALALLHSFDPAGVGARSASECLKLQLLRLDASP
TRTLALEIVAHHLELLAARDFTRLRKHLKASDDDLRDAHVLIRSLEPFPGAAYGKAEADY
VVPDIMVRKTAQGWQAELNPEVVPKLRINHLYANILRNNRGDPGSGSLRQQLQEARWLIK
NIQQRFETILRVAQAIVERQKSFFVHGEIAMRPLVLREIADTLGLHESTVSRVTTGKYML
TPFGTLEFKYFFGSHVSTDTGGAASSTAIRALIKQLIGAENPKSPLSDSRIAELLAEQGF
VVARRTVAKYREALKIPAVNLRKSL
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgaaagccagcctccaactccgcctatcgcagcatcttgcgctgacgccgcaactgcag
cagtccatccggctgcttcagttgtccacgctcgaattgcagcaggaagtcgcaatggcg
atctcgcagaatccgctcctcgagaacgaggacgactggatcgcgagcccgctgcgcgtg
gcggccgacggctcgctgatcgcccaggcgccgaattcctccgctccgcccgaccagatg
ggcggcagcacgtcgtcatcgtccaccagcagcagcgagcgcgccgagaacggcgagccg
cagggcgtggacgaatacaacggcctcgcgggcgacagtaacggcgacgcgtcgcaatgg
aatctcgacgactacggccgctcgggcaacgcctcggacgacgacgacctgccgccgctg
caaatccacgaatcgagcacctcgctgcgcgatcacctgatggcgcaattgcgcgtcacc
caggcgagtccgcgcgaccgcgcgctggtcacgttcctgatcgagtcgctcgacgacgac
ggctaccttgccgccacgctcgaagaagtgctggcggatctgcccgaagagctcgaagtc
gacctcgacgagctgaatgccgcgcttgcgctgctgcatagcttcgacccggccggggtc
ggcgcgcgctccgcgtcggaatgtctcaagctgcaattgctgcgactcgatgcctcacct
acccgcacgcttgcgctcgaaatcgtagcgcaccacctggaattgctcgcggcgcgcgac
ttcacgcgcctgcgcaaacatctgaaagccagcgacgacgacctgcgcgatgcacacgtg
ctgatccgctcgctcgaaccgttccccggcgccgcctacggcaaggccgaagcggactat
gtcgtgccggacatcatggtgcgtaaaacagcacagggctggcaggccgagctgaacccg
gaagtcgtgcccaagctgcgtatcaaccatctttacgcgaatatcctgcgcaataaccgg
ggcgatccgggcagcggttcgttgcgccagcaactgcaggaagcgcgctggctgatcaaa
aatatccagcagcgtttcgagacgatcctccgggtggcgcaagccattgtggagcgtcaa
aagagcttttttgtgcatggcgaaattgccatgcgccccttggttttgcgggaaattgct
gatacgctgggcctacacgagtcaactgtctcgcgtgtgacaaccggcaaatacatgctg
accccattcgggacgcttgaatttaagtacttcttcggatcacacgtttcgactgacacg
ggcggcgcggcgtcttcaacggcgatccgtgcgctcatcaagcaactgataggagcggaa
aacccgaaatctcctctttcagacagccgcatagccgaactgctggcggaacagggcttc
gtggtcgcacggcgtaccgtcgcgaaatatcgtgaagcgctcaagattccggcagtcaac
ctgcgcaagtcgttatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system