KEGG   Bacteroides xylanisolvens: BXY_30510
Entry
BXY_30510         CDS       T02579                                 
Name
(GenBank) exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bxy  Bacteroides xylanisolvens
Pathway
bxy03410  Base excision repair
bxy03430  Mismatch repair
bxy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bxy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BXY_30510
   03430 Mismatch repair
    BXY_30510
   03440 Homologous recombination
    BXY_30510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bxy03400]
    BXY_30510
DNA repair and recombination proteins [BR:bxy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     BXY_30510
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BXY_30510
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BXY_30510
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1
Other DBs
NCBI-ProteinID: CBK68066
UniProt: D6D0W4
Position
complement(3778018..3779736)
AA seq 572 aa
MNHKWNYRPITPEQAETSQTLAQELGISPILGQLLVQRGITKAADAKKFFRPQLPDLHDP
FLMKDMDIAVERLNRAMGKKERILIYGDYDVDGTTAVALVYKFIQQFYSNLDYYIPDRYN
EGYGISKKGVDYAAETGVGLIIVLDCGIKAVEEITYAKEKGIDFIICDHHVPDDILPPAV
AILNAKRLDNTYPYTHLSGCGVGFKFMQAFAISNGIEFHHLIPLLDIVAVSIASDIVPIM
GENRILAYHGLKQLNSNPSIGMKAIIDVCGLSEKEITVSDIVFKIGPRINASGRIQNGKE
AVDLLTEKDFSAALEKAGQINQYNETRKDLDKSMTEEANNIVANLEGLADRRSIVLYNEE
WHKGVIGIVASRLTEVYYRPAVVLTRTDDMATGSARSVSGFDVYKAIEHCRDLLENFGGH
TYAAGLSMKVENVDAFTKRFEDYVSRHILPEQTSAVIEIDAEIDFRDISSKFFNDLKKFN
PFGPDNTKPIFCTHHVYDYGTSKVVGRDQEHIKLELVDNKSNNVMNGIAFGQSSHVRYIK
TKRSFDICYTIEENTHKRGEVQLQIEDIKPIE
NT seq 1719 nt   +upstreamnt  +downstreamnt
atgaatcacaaatggaattatcgacccattacacccgaacaggcagagacaagccagaca
ttggcccaggaattagggattagcccgattcttggacaacttttggtacagcggggaatt
acgaaggcagcagatgccaagaagtttttccgcccgcagttgcccgacctgcacgatccg
ttcctgatgaaggatatggatattgcagtagaacgtctgaacagggcgatgggaaagaaa
gaacgtattctaatttatggagattatgacgtagacggtactactgccgtggcattggtc
tacaagtttattcaacagttctattcgaaccttgattattacatacccgaccgctacaac
gaagggtatggcatttctaaaaaaggagtggactacgccgctgaaaccggtgtgggactg
attattgtactcgattgcggaataaaagcagtagaggaaatcacgtatgccaaagaaaaa
gggattgactttatcatctgcgaccatcacgtaccggatgatattctcccgcctgccgta
gctatattgaacgccaaacgcctggacaacacgtacccgtacacccacctttccggttgt
ggagtcggtttcaagtttatgcaggcgttcgccattagtaacggtatcgaattccatcat
ctgattccgttgctcgacatcgtagccgtgagtatcgcatcggacatcgttccgattatg
ggtgaaaaccgtattctcgcctaccacggtctgaaacaactgaacagtaacccgagtatc
ggcatgaaggccattatcgatgtatgcggactttctgaaaaagaaattactgtcagcgat
attgtgtttaaaatcggaccgcgcatcaatgcatcgggacgtattcagaatgggaaagaa
gctgtagacttgctaacggaaaaagatttctcggcggcacttgagaaagccggacaaatc
aaccagtacaacgaaacccggaaagacctcgacaagagtatgacggaggaagcaaacaac
atcgttgccaatctggaaggattagccgaccgccgctctattgtgctctacaacgaagaa
tggcacaaaggagtgatcggtatcgtagcttcccgtctgacggaagtgtattaccgccct
gccgtggtactgacacgaacggatgacatggcgacaggctccgcacgttctgtttccggc
ttcgatgtatataaagcaatcgagcattgccgcgacctgctggaaaacttcggaggacat
acatacgccgccggactatcaatgaaagtggagaatgtggatgcttttaccaaacggttc
gaagactacgtttcacggcatatcctaccggaacaaaccagtgccgtcatcgagattgat
gctgaaatcgacttcagggatatttcgtccaagttcttcaacgacctgaagaaatttaat
cctttcggccccgacaacacgaaacccattttctgcactcatcacgtctatgattatgga
acgagtaaagtagtgggacgcgaccaggaacatatcaagctcgaactggttgataataaa
tcgaataatgtaatgaacggtatcgcgttcggacagagttcgcacgtgcgctatatcaaa
acaaaacgttcgttcgacatctgttacaccattgaagaaaacacgcataagcgtggcgaa
gttcaacttcaaatcgaggatataaagccgattgaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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