KEGG   Burkholderia sp. YI23: BYI23_C008960
Entry
BYI23_C008960     CDS       T01711                                 
Name
(GenBank) extracellular solute-binding protein family
  KO
K02055  putative spermidine/putrescine transport system substrate-binding protein
Organism
byi  Burkholderia sp. YI23
Pathway
byi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:byi00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BYI23_C008960
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:byi02000]
    BYI23_C008960
Transporters [BR:byi02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    BYI23_C008960
SSDB
Motif
Pfam: SBP_bac_8 SBP_bac_6 SBP_bac_1 SBP_bac_11 PBP_like_2
Other DBs
NCBI-ProteinID: AET93042
Position
3:1050197..1051246
AA seq 349 aa
MKLSRTLASLAALVALGVASTSAWSQSKTIYIGMNGGPMEKAYTSGVLPDFEKANNVKVV
VVPGTSSDVLAKLLANRNSPQIHVAFLDDGVMARAVSMGVCEKLDDSPVLKELYPFARLK
DDMGAGVQLGMTGIGYNTKLFKEKGWAPPTSWMDFADPKYKGKVVFQSASSSTFGLHGFL
AINRLLGGSEKNVEPGFSKWATTVGPNVVEYIPNSAKLSEMITTGEAGLFPLTPTAIGDL
KDKGLPVAYVAPKEGAVLLLVDLCVVKNNPDPALAQKLAQYLLSAPAQTKAAEAGKQIPT
NSQAKMTPEMDKHLGDLNALVKKVTVVDWDTINANRAQWDKRWNQQIEK
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgaagctgtcccgcacactcgcctcgcttgccgcgctcgtcgctctcggcgtcgcgtcg
acgtccgcctggtcgcagagcaagactatctatatcggcatgaacggcgggccgatggaa
aaggcctatacgagcggcgttctgcccgacttcgaaaaggccaacaacgtgaaggtcgtc
gtggtgccgggcacgtcgtccgatgtgctcgcgaaactgctcgcgaaccgcaacagcccg
cagatccacgtcgcgtttctcgatgacggcgtgatggcgcgcgccgtcagcatgggcgtg
tgtgagaagctcgacgattcgcccgtgctcaaggagctctatccgttcgcgcgcctgaag
gacgacatgggcgcgggcgtgcagctcggcatgacgggcatcggctacaacacgaagctc
ttcaaggaaaagggctgggcgccgccgacctcgtggatggatttcgccgatccgaagtac
aagggcaaggtcgtgttccagtcggcgtcgagcagcacgttcggcctgcacggcttcctt
gcgatcaaccgtctgctcggcggaagcgaaaagaatgtcgagccgggcttcagcaaatgg
gcgacgacggtcggcccgaatgtcgtcgaatacattccgaattcggccaagctctcggag
atgatcacgacgggcgaagccggcctcttcccgctcacgccgaccgctatcggcgatctg
aaggacaagggcttgccggtggcctatgtcgcgccgaaggaaggcgcggtgctgctgctc
gtcgatctgtgcgtcgtgaagaacaatccggacccggcgctcgcgcaaaagctcgcgcag
tacctgctgtccgcgcccgcgcagacgaaggcagccgaagcgggcaagcagattcccacc
aactcgcaggcgaagatgacgcccgagatggacaagcatctcggcgatctcaatgcgctc
gtgaagaaagtgaccgtcgtggactgggacacgatcaacgcgaatcgcgcgcagtgggac
aagcgctggaatcagcagatcgagaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system