KEGG   Bipolaris zeicola: COCCADRAFT_21936
Entry
COCCADRAFT_21936  CDS       T03110                                 
Name
(RefSeq) hypothetical protein
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
bze  Bipolaris zeicola
Pathway
bze03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:bze00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    COCCADRAFT_21936
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bze03009]
    COCCADRAFT_21936
Ribosome biogenesis [BR:bze03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    COCCADRAFT_21936
SSDB
Motif
Pfam: WD40 Utp13 ANAPC4_WD40 NBCH_WD40 Ge1_WD40 WDR54 PALB2_WD40
Other DBs
NCBI-GeneID: 19145094
NCBI-ProteinID: XP_007707003
JGI: 21936
UniProt: W6YLI2
Position
Unknown
AA seq 904 aa
MAAQRTAVKTTYEVGRTLQPIYSGGSLALSQDGRILAASLGEDVLLTDLTNGQELARAEG
DGEAITSLTLTPSASHLIVCSRSLSMRLFSLNPSENGDDSIELQLVRTLRPHTSPVVTLA
TDRTGTLLATGGADGVVKVWDIRGGYTTHAFHGHGGVVSALHFFEVEVAEREDASENNKK
RKRKSRQEGAEIEQAQGESQIQFRLASGAEDGKIRIWDLHKRKSAAILDSHVSVVRSLQY
SPQEKLLLSGSRDKTLIAWDSNRWKAQRTIAALEGIESAGFVADGKILYSGGENGRVRLW
STSSGRELTSEQEPGIETDEIVNILYYPTLSYLISVHADQVLNFHSLKSAESLVVEETID
PLPVFRRVSGTHDEVIDIAYVGRDKSLLALNTNSEDIRIITLNESEGDDATEGRYFGADV
GLLKGHDDIVICLDVDWSGHWLVTGAKDNTARLWRLDPEHGSYTCAAVLTGHAESLGAIA
LPHIVPQESSAAFTDPLSHPPAYIVTGSQDRTVKRWDMTKEMKGKLRAKYTRKAHDKDIN
AIDIDPSGTLFASASQDRTVKIYSAAEGEAIGVLRGHRRGVWSVKFAPKDSQAPNSSGKG
LIATGSGDKTVKIWSLADYSCLLTLEGHSNSVLKLAWLPYRPVDARDKRGPQVASAAGDG
LVKIWDSISGETMSTLDNHTDRVWALVAHPQTGALVSGGGDSVITFWQDTTSTTLEAATT
AETERIELDQKLQNYAYAGNYRDAIVLALQMDQPARLFSLFKSVVESDSPDPDSLSGLNS
VDAVLASLADEQLYKLLLRLRDWNTNVRTAPIAQKILHTIVKSYPAARLAGLKPQGKVAA
KGSLKDVLEAIKVYSERHYRRVEELVDESYLLDFTLREMDEVGGVSEGMNGLGLEGGRDV
VMVE
NT seq 2715 nt   +upstreamnt  +downstreamnt
atggcggcgcaaagaactgctgtgaagaccacctacgaggttggccgtaccttgcagccc
atctactcgggaggcagtttggcattgagccaggacgggcgcatcctggctgctagcttg
ggtgaagatgttcttctcaccgacctcacaaatggacaagagctggcaagagccgagggc
gacggcgaggcaatcacatcattgactttaacgccttctgcctcgcatctcattgtatgc
tcgcgatcactgtccatgcgcctattttctctcaacccttctgaaaacggggacgactcc
atcgaactccaacttgtccgcacccttcgaccgcatacgtcacctgtagtcactctggcc
acagaccgcacaggaacgctactagcaaccggaggcgcagatggtgttgtcaaagtttgg
gacattcgcggcggctacaccacccacgcttttcatggccatggtggggttgtttccgcg
cttcatttctttgaggttgaggtagctgagcgggaagatgcatccgaaaacaacaagaaa
cggaagaggaaatcaagacaagaaggtgccgagatcgaacaagcccagggcgaaagtcag
atacaattccgactggcctcgggtgccgaggacggaaaaattagaatctgggatttgcac
aagaggaagagcgccgccatattagattcgcacgtttctgtggttcgatcgctgcagtat
tcaccacaggaaaagctgctcctctctggtagtagagacaagactctgattgcatgggac
tcgaacaggtggaaggcgcaacgcaccattgccgcactcgaaggcatcgagagcgccggt
tttgttgcagacggaaagatcttgtactctggtggagaaaacggcagagtacgactttgg
tcaacatcaagcggacgcgaactcacatcagagcaagagccgggtatagaaacggatgag
attgtcaacattctctactacccaaccctgtcttacctgatctcagtacatgctgaccag
gtactcaactttcactctctcaaatctgccgaatcccttgtcgtcgaggagacgattgat
cctctaccagtctttcggcgtgtctccggaacgcatgacgaagtgattgatattgcgtac
gtcggccgtgacaaatcattgctggcattgaacaccaactccgaggacattcgcatcatc
acattaaacgagtcagagggagacgacgcaacagaaggaagatactttggcgcagacgtg
ggactactaaaaggccatgatgatattgtcatctgtctagatgtggactggtcaggacat
tggctcgtcacaggtgcaaaggacaatacagcccggctatggcgactagatcccgaacac
ggatcatacacttgtgcagcagttttgacaggtcatgctgaatcgctgggtgcaattgcg
ttacctcatatagtgcctcaggagtcgtctgccgcattcacagatccgttatcacacccc
ccggcatacattgtaacaggatcccaagatcggaccgttaagcggtgggacatgactaag
gagatgaagggaaagctacgagcaaagtatactcgcaaggcacacgataaggatatcaac
gcaattgacatcgacccgtctgggactctgttcgcttctgcgtcacaggaccgtacagtc
aagatctattcggctgctgaaggagaagcgattggtgtccttcgaggtcaccgtcgtggt
gtctggagcgtcaagtttgcaccaaaagactcacaggctccgaattcgagtggcaagggc
ttgattgcaactggcagtggagacaagacggtcaagatctggagtctggcggactacagc
tgtcttttgacgcttgaaggccactccaacagtgttctgaagctcgcatggctcccatac
cgtccagtggacgcgcgagacaaacgaggtccgcaagtcgcctctgcagccggtgacggc
ttggtcaagatctgggactccatctcgggcgagacaatgtctaccctcgacaaccacacc
gaccgtgtctgggccctcgtcgcccaccctcaaactggcgccctcgtctctggcggcggt
gacagcgtcataaccttctggcaagacacaaccagcaccacgctcgaagccgccaccacc
gccgaaaccgagcgcatcgaactcgaccagaaactccaaaactacgcctacgcaggaaac
taccgcgacgccatcgtcctcgccctccaaatggaccaacccgcccgcctcttctccctc
ttcaaatccgtcgtggaatcagactctccagacccagactccctatccggtctcaactcc
gtcgacgccgtcctcgcatccctcgccgacgaacaactctacaaactcctcctccgcctc
cgcgactggaatacaaacgtccgcaccgctcccatcgcccagaagattctacacacgatt
gtcaaatcgtacccagcagcacggcttgcggggctgaagcctcaaggcaaagttgcggcg
aaggggagtctgaaggatgtgctggaggctatcaaggtttattcagagagacattatagg
cgagtagaggagttggtggatgagagttatttgttggattttacattgagagagatggat
gaggtcgggggtgtgagtgagggcatgaatgggttggggttggaaggcggaagggacgtt
gtcatggttgaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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