KEGG   Bacteroides zoogleoformans: C4H11_06675
Entry
C4H11_06675       CDS       T05371                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
bzg  Bacteroides zoogleoformans
Pathway
bzg02020  Two-component system
bzg02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:bzg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    C4H11_06675 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    C4H11_06675 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bzg03021]
    C4H11_06675 (rpoN)
Transcription machinery [BR:bzg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     C4H11_06675 (rpoN)
SSDB
Motif
Pfam: Sigma54_CBD Sigma54_DBD Sigma54_AID LacI HTH_IclR
Other DBs
NCBI-ProteinID: AVM52660
UniProt: A0A562VIC7
Position
1558819..1560306
AA seq 495 aa
MAQGSRQIQTQTQQQVQTLSPQQILVVKLLELPTMELEDRVRAELLENPALEEGKDEAAT
DEYADAPEAGTDDGGDTDYDSLSDYLTEDDIPDYKLQENNRSKGEQPEEIPFSDTTSFYE
TLKEQLSERNLSERQRELAEYLIGSLDDDGLLRKSLDSISDELAIYAGIDASVQELEEAL
KTVQDFDPAGLGARNLQECLLIQIRRKMEQQSPTTPDSLLRIEEDIIGQCYEEFTRKHWE
KIRQKLNLPEDVCDRAIKEVCKLNPRPGASLGETIGKNMQQIVPDFIVDTYDGGTINLTL
NNRNVPELRMSRDFTEMVEEHTKNKANQSKASKDAMMFLKQKMDAAQGFINAVKQRQNTL
MTTMQAIIDLQRPFFLEGDESLLRPMILKDVAERAGLDISTVSRVSNSKYVQTNFGVYPL
KFFFNDGYTTGDGEEMSVREIRKILKECVENENKKKPYTDDELTEILKEKGYPIARRTVA
KYRQQMNIPVARLRR
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggcacaaggttcccgacagatacagacgcagacgcaacagcaggtacagacgctgtcg
ccgcaacagattctggtggtgaagttgctggaacttcccaccatggaactggaagaccgc
gtgcgtgccgaacttttggagaatccggcactggaagagggcaaagacgaagccgcgacc
gacgagtatgccgacgcacccgaagccggcacggacgacggaggcgacaccgactacgac
tcgctgagcgactacctgaccgaagacgacatccccgactataaattgcaggagaacaac
cggagcaaaggcgagcagcccgaagagattcctttttcggacaccacctcgttctacgaa
accctgaaggagcaactgagcgaacgcaacctcagcgaacggcaacgcgaactggccgag
tatctcatcggctcgctggacgacgacggcctgctgcgcaaatcgttggacagcatcagc
gacgagctggccatttatgcgggcatcgacgcctctgtacaggaactggaggaggcgctg
aagacggttcaggatttcgaccccgccggactgggggcccgcaacctgcaggaatgtctc
ctcatccagattcgccgcaagatggaacaacagtcgcctactacccccgactccttgctg
cgcatcgaagaggacatcatcggccaatgctacgaggagttcacccgcaaacattgggag
aagatacggcagaagctgaatctgccggaagacgtctgcgaccgggccatcaaggaggtc
tgcaagctgaacccccgcccgggtgcctctttgggcgaaaccatcggcaagaacatgcaa
cagattgtgccggacttcatcgtggatacgtatgacggcggcaccatcaacctgacgctg
aacaaccgcaacgtgccggaactgcgcatgagccgcgacttcaccgaaatggtggaggag
cataccaagaacaaggcgaaccaatcgaaagcgtcgaaggacgccatgatgttcctgaaa
caaaagatggacgcggcgcaaggcttcatcaacgccgtgaagcaacggcagaatacgctg
atgaccaccatgcaggccatcatcgacctgcaacgcccgttcttcctcgagggcgacgag
tcgctgctacgccccatgatactgaaagatgtggccgagcgcgccgggctggacatctcg
accgtctcgcgcgtaagcaacagcaaatacgtgcagaccaacttcggagtgtatccgctg
aagttcttcttcaacgacggctataccaccggagacggcgaagaaatgtccgtgcgcgaa
atacgcaagatactgaaagaatgcgtggaaaacgagaacaagaagaagccctacacggac
gacgaactcaccgaaatattaaaagagaaaggctatccgatagcccgccggacggtggcg
aagtaccgccagcagatgaatattccggtggcaagactgagacgataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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