KEGG   Caballeronia sp. SBC2: SBC2_59810
Entry
SBC2_59810        CDS       T06459                                 
Name
(GenBank) Bacterial extracellular solute-binding protein
  KO
K02055  putative spermidine/putrescine transport system substrate-binding protein
Organism
caba  Caballeronia sp. SBC2
Pathway
caba02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:caba00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SBC2_59810
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:caba02000]
    SBC2_59810
Transporters [BR:caba02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    SBC2_59810
SSDB
Motif
Pfam: SBP_bac_8 SBP_bac_6 SBP_bac_1 SBP_bac_11 PBP_like_2
Other DBs
NCBI-ProteinID: QIE27906
Position
pSBC2-2:557680..558732
AA seq 350 aa
MKAFHTVASVGIAALCAAALSTSAQAEDKTIYIGMNGGPMEKAYTSEVLPEFEKANNVKV
VVVPGTSSDILAKLLANKAKPQIHVVFLDDGVMARAVSMGVCQKLDDSPELKQLYPFARM
KGDIGAGVQLGMTGIAYNTKLFAANGWAPPTSWLDFADPKYKDKVVFQSASSSTFGLHGF
LMINRLEGGSEKNVEPGFTKWQSTVGRNVIEYIPNSAKISEMVQTGQAGLFPLTPTAVGD
LQAKGIPVAYVNPKEGPVLLLVDECVVANNPDPVLAQKLAAFMISASAQSKAASAGRQIP
TNRQATMPDSMQKQLGNLDDLVKKVNVVDWDVINANRPQWDARWNRQVER
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgaaagcgtttcatacagtagccagtgtgggcatagctgccttgtgcgcagcagccctc
tccacgtccgcgcaagccgaagacaaaaccatatacattggcatgaacggcggcccgatg
gaaaaggcctacacgagcgaggtcctgcccgaattcgaaaaggccaacaacgtaaaagtg
gttgtggtgcccggcacatcatcagacattctcgccaagctcctcgcgaacaaagccaaa
ccacaaatccacgtagtgttcctcgacgatggcgtgatggcacgcgcagtcagcatgggc
gtctgccaaaaactcgacgacagccccgaactcaagcagctctatccgttcgctcgcatg
aagggcgacatcggagcgggcgtgcagctcggcatgaccggcattgcgtacaacacgaaa
ctctttgcggcaaatggctgggcgccgccaacgtcgtggctcgatttcgctgatccgaaa
tacaaggacaaagtggtgttccagtcggcctcgagcagcacgttcggcctgcatggcttc
ctgatgatcaaccggcttgagggtggctcagagaagaacgtcgaacctggcttcacgaaa
tggcaaagcaccgtgggccggaacgtgatcgagtacatcccgaactcggcgaagatctca
gagatggtccagaccggtcaagccggcctgttcccgctcacgccgactgcagtgggtgac
ctgcaggcaaagggaattcccgtcgcctacgtgaaccccaaggaaggtccggtgctgctg
ctcgtcgatgaatgtgtggtcgcgaacaaccccgatccggtcctcgcgcaaaagctcgcg
gcgttcatgatctcggcatctgcacaaagcaaggcagcgagcgccggccgccagatcccg
accaaccgccaggcgaccatgcccgactcgatgcagaagcaactgggcaacctcgatgac
ctcgtgaagaaggtcaacgtggttgattgggatgtgatcaacgcaaatcgtccgcaatgg
gacgcgcgctggaatcgtcaggtcgaacggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system