KEGG   Caballeronia sp. SBC2: SBC2_80800
Entry
SBC2_80800        CDS       T06459                                 
Symbol
speF
Name
(GenBank) Inducible ornithine decarboxylase
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
caba  Caballeronia sp. SBC2
Pathway
caba00330  Arginine and proline metabolism
caba00480  Glutathione metabolism
caba01100  Metabolic pathways
caba01110  Biosynthesis of secondary metabolites
caba04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:caba00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    SBC2_80800 (speF)
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    SBC2_80800 (speF)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    SBC2_80800 (speF)
Enzymes [BR:caba01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     SBC2_80800 (speF)
SSDB
Motif
Pfam: OKR_DC_1 OKR_DC_1_C OKR_DC_1_N Beta_elim_lyase
Other DBs
NCBI-ProteinID: QIE30004
Position
pSBC2-4:194515..196851
AA seq 778 aa
MLYDQMFGFLFCCALPLPPALPSSRFQRLVDELERLRYATKVTVTVAEASSAIRSEAAVG
CVIVEWSLTESETDVEAFVRFVRERGLDVPIFILVERHLLAEIPVAVLGHVTGYVFIEED
TPEFVARNLVSHLRTYADSLKTPFFGAMVDYAEQANQMWTCPGHNGGVFYQKSPIGRAFI
KHLGEAVFRNDLDNSVVELGDLLVHEGPALAAQKAAARIFGAERTYFVLNGTSTSNKIAL
TALVTPGDLVLFDRNNHKAAHHGALLLGGGIPVYLQTQRNAHGMIGPIDFDALDEDRIRD
GIRYNKLVTDPKAWQRERPFRVAVIEQCTYDGTIYDAQMLIEKIGHLCEYILFDEAWAGF
MKFHPLFKGRFAMGIEGLDANAPGILATQSTHKQLAGFSQASQIHVKDAHLDGQRRQVSH
RRFNETFMQHSSTSPFYPLFASLDVGAQMMKGRSGEVLWDDTIKLGIEMRKKIRALKHDY
EATETDPARRWFFDPFVPDEVTATGGMRRWEDLSTDELASNPRYWELAPDAKWHGFGHLA
PGYAMTDPNKLTLITPGFDRTTGEYAQRGIPAAVLAEFLRERRIVPEKNDLNSILFLLTP
GLESSKAGTLLSALVRFKQLHDENALLDDVIPTFVAAHHERYAGIGLRELCADMHAFYRE
RNASRLQREQFRAAHFPEMAMTPQAAMHELVRNNVELLPIDKIEGRIAATLGLVYPPGIA
VVVSGERYTERAMPTLDYFRMFEEGGNRFPGFENEIQGIYRKKETDGSVRLYTYVVSG
NT seq 2337 nt   +upstreamnt  +downstreamnt
atgctatatgaccagatgttcggcttcctgttttgctgcgcgttgcccttgccaccggcg
ttgccatcgtcacgctttcagcgcctcgtcgatgaactcgaacgcctgcggtacgcgacc
aaggtcacggtcacggtggcggaagcatcctccgcgatccgcagcgaggctgcagttggc
tgtgtgatcgtggaatggtcgctgaccgagtcagagacggacgttgaggctttcgtgcgc
tttgtccgggagcggggtctggacgtacccatcttcatcctggtcgagcgccatctgctc
gcggaaattccggttgcagtgctggggcatgtgacgggttatgtgttcatcgaagaggat
acgcctgagttcgtcgcccgcaatctagtgagccatctgcggacgtacgcggactcgctc
aagacgccgttcttcggtgcgatggtcgactatgcggagcaggcaaaccagatgtggacc
tgtccgggccacaacggcggcgtgttttaccagaagagtccgatcggccgcgcgttcatc
aagcatctgggcgaagcggtattccgtaatgacctggataactccgttgtcgaactgggt
gacctgctggttcatgaaggccccgcgctcgctgcgcagaaagcggcagcgcggatcttc
ggcgctgagcgaacctacttcgtgctgaacggtacgtccacgtccaataagattgcattg
accgcactcgtgacaccgggtgacctggtgctcttcgatcgcaacaaccataaggctgca
catcatggcgcgctgctgctcggcgggggcatccccgtctatttgcagacgcaacgcaac
gcgcacgggatgatcggcccgatcgatttcgacgcgctcgacgaagaccgcatccgcgac
ggcattcgttacaacaagctcgtcaccgatcccaaggcgtggcagcgtgagcggccgttt
cgtgttgcggtgatcgagcaatgcacctacgacggcacgatctacgacgcgcaaatgctg
atcgagaagatcgggcatctgtgcgaatacattctcttcgacgaagcctgggccggcttc
atgaagttccatccgttgttcaagggacgtttcgcgatgggcatcgagggactggatgcc
aacgcgcccggcatccttgccacgcagtcgacacacaagcaactcgctggtttctcgcag
gcgtcgcagatccacgtgaaagacgcgcaccttgacggccagcgtcggcaggtaagtcac
cggcgcttcaacgagaccttcatgcagcactcgtccacgtcgccgttctatccgttgttc
gcctcgctcgatgtgggcgcgcaaatgatgaagggccgctctggcgaggtgctgtgggac
gacacgatcaagctcgggatcgagatgcgcaagaagatccgcgcgctgaaacacgactac
gaagcgacggagacggaccccgctcggcgctggttcttcgatccgttcgtgcctgacgag
gtcacagccacgggcggcatgcgacgctgggaagacctgtcgacagatgaactcgcgagc
aacccacgttactgggagctcgcgccggatgcgaaatggcatggcttcggccaccttgct
ccgggctatgcgatgacagacccgaacaagctgacgctcatcacgcccgggtttgatcga
accacgggcgaatacgcgcagcgcggcattccggcggcggtgctcgccgagttcctgcgc
gaacggcgcatcgtgcctgagaagaacgacctcaacagcatcctgttcctgctgacgcct
gggctggagtcgagcaaagcgggcacgctgctttcggcattggtgcgtttcaagcaattg
cacgacgagaacgcgcttctcgacgatgtcattcccaccttcgtcgccgcgcatcacgag
cgttacgcaggaatcggcttgcgtgaactttgcgccgacatgcatgcgttctatcgcgag
cgcaatgcgagccgcctgcagcgcgagcagtttcgcgcagcgcactttcccgagatggcg
atgacgccgcaagccgccatgcatgaactggtacgcaacaacgtggagctgttgccgatc
gacaagatcgagggacgaatcgcggcaacactcggtcttgtctatccgccgggtatcgcg
gtggtggtatccggcgagcgttacaccgagcgcgcgatgccgacgctcgattacttccgg
atgttcgaggaaggcggcaaccgtttccctggtttcgagaacgagatccagggcatctat
cgaaagaaggagaccgacggcagcgtgcggctctatacctacgtcgttagtggttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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