KEGG   Caldithrix abyssi: Cabys_1429
Entry
Cabys_1429        CDS       T04549                                 
Symbol
ddl
Name
(GenBank) ddl D-alanine-D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
caby  Caldithrix abyssi
Pathway
caby00470  D-Amino acid metabolism
caby00550  Peptidoglycan biosynthesis
caby01100  Metabolic pathways
caby01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:caby00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Cabys_1429 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Cabys_1429 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Cabys_1429 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:caby01011]
    Cabys_1429 (ddl)
Enzymes [BR:caby01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     Cabys_1429 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:caby01011]
 Precursor biosynthesis
  Amino acid ligase
   Cabys_1429 (ddl)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 CPSase_L_D2 ATP-grasp RimK GARS_A ATP-grasp_4 ATPgrasp_ST Glyco_transf_4
Other DBs
NCBI-ProteinID: APF18178
UniProt: A0A1J1C847
Position
1725745..1726749
AA seq 334 aa
MGGDSTEREVSLVTGDKVAKALEENGHQVIKIDPIATKEEQTELNKTDRHWIGIQYPEID
MLPLHRGSMYLKNLLIVKRLKPDLVFNALHGGKGENGVVQGMLDAAQIPYTGSGRVASML
AMEKDISKTYFRNAKLPTPRAIILERPDASRKKLKKIDFPQVVKPNNQGSTIGLKIVHNH
QELEEAIDNAFTLSPKVIVEEFIPGREITVGIIGNRTFPVVEIKPKHGIYDYECKYTKGM
SFYEVPANLDEETARIVQKISLKAHTVLGCHGYSRVDLRLSPEKEPYILEVNTLPGLTDI
SLLPMACAHAGINYNALVEMIVEEALKKPKLPSV
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgggtggagattcgaccgaacgcgaggtttcgttggtaaccggagataaagtggctaaa
gccctggaagaaaacggtcatcaggttattaagatcgatccgattgccaccaaagaggaa
cagaccgaattaaacaaaaccgaccgccactggatcggcattcaatatccggaaattgac
atgttaccgctgcatcgcggcagcatgtatttgaaaaatcttttaattgtaaagcgactt
aagccagaccttgtgtttaacgctttgcacggcggaaagggcgaaaacggcgtggtgcag
ggtatgctggacgccgcccagattccgtacaccggctccggacgcgtggcatccatgctg
gccatggaaaaagacatcagtaaaacgtatttccgcaacgccaagcttcccacgcccagg
gccatcattctggaacgtcccgacgcctcgcgcaaaaaattgaaaaaaatcgactttcct
caggtcgttaaacccaacaaccagggctcgacaatcggcttaaagatcgttcataatcat
caggaactggaagaggccatagacaacgcctttaccttaagccccaaggtcattgttgag
gaatttattccggggcgcgaaattaccgtgggtataattggcaatcgtacctttcctgtg
gtggaaattaaaccgaagcacggaatttacgattacgaatgcaaatacaccaaagggatg
agcttttacgaagtgccggccaatctggatgaagaaacggcgcgcatcgtgcaaaagatc
tctttaaaggcgcacaccgtgctgggctgccatggatattcgcgcgtggatctgcgtctc
tctccggaaaaagagccgtatattctggaggtaaataccctgccgggcctgacggacatc
agtctgctgcccatggcctgcgcccatgccggtattaattacaatgcgcttgtggaaatg
atcgtcgaagaagcgcttaaaaaaccaaaattaccatcggtttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (47)   
   KEGG ORTHOLOGY (1)   
   RefGene (44)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (73)   

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