KEGG   Caldithrix abyssi: Cabys_159
Entry
Cabys_159         CDS       T04549                                 
Name
(GenBank) nth DNA-(apurinic or apyrimidinic site) lyase/endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
caby  Caldithrix abyssi
Pathway
caby03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:caby00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Cabys_159
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:caby03400]
    Cabys_159
Enzymes [BR:caby01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Cabys_159
DNA repair and recombination proteins [BR:caby03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Cabys_159
 Prokaryotic type
     Cabys_159
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_5 DUF3349 B5 HHH_8
Other DBs
NCBI-ProteinID: APF16910
UniProt: H1XTZ9
Position
186127..186822
AA seq 231 aa
MTYNKLTGKELSRRQINEILKILEETYNGAETALKYKTPFQLLISTMLAAQSTDKRVNIV
TEKLFKDYPDAASMRRMSEEQIREYIKTVGLYKAKAKNILNVSEILDEKYGGDIPATREE
LMALPGVGRKTANVVLSIAKNVPAIAVDTHVFRVSNRIGLARAKDVLNTEKQLMESIPKE
KWSQAHHWLIWHGRKICRARNPLCTECPLNRICLYYRQNEKEDEGAAIAEK
NT seq 696 nt   +upstreamnt  +downstreamnt
atgacttataacaagctcacaggtaaggagctcagcagacggcaaattaatgaaatactg
aagattctggaagaaacatacaacggggcggagacggcgttaaaatataaaacgcccttt
caattgttaatttcgaccatgctggccgcgcaaagcacggacaaacgcgtaaatattgtg
acagaaaagttgtttaaagattacccagacgcggcttccatgcggcgcatgagcgaagag
cagatacgagaatacataaaaaccgtggggctttacaaagcaaaagctaaaaatatttta
aacgtaagtgagatcctggatgagaaatacggcggcgacatccccgccacgcgtgaagaa
ttgatggctctgccgggcgtagggcgaaaaacagccaacgtagttttgagcattgccaaa
aacgtgccggccattgcggtggatacgcacgtgttccgcgtcagcaaccgaattggactg
gcgcgagccaaagacgttttgaacacggaaaaacaattgatggaaagcattcccaaagaa
aaatggtcgcaggctcatcactggctgatctggcacgggcgaaaaatttgccgggcgcgc
aatcctctttgcacggaatgcccgctcaatcgaatctgcttgtattaccggcaaaatgaa
aaagaggacgaaggggcggcaatcgctgaaaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (22)   

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