KEGG   Caldithrix abyssi: Cabys_1903
Entry
Cabys_1903        CDS       T04549                                 
Symbol
trpB
Name
(GenBank) trpB tryptophan synthase, beta chain
  KO
K01696  tryptophan synthase beta chain [EC:4.2.1.20]
Organism
caby  Caldithrix abyssi
Pathway
caby00260  Glycine, serine and threonine metabolism
caby00400  Phenylalanine, tyrosine and tryptophan biosynthesis
caby01100  Metabolic pathways
caby01110  Biosynthesis of secondary metabolites
caby01230  Biosynthesis of amino acids
Module
caby_M00023  Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:caby00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Cabys_1903 (trpB)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    Cabys_1903 (trpB)
Enzymes [BR:caby01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     Cabys_1903 (trpB)
SSDB
Motif
Pfam: PALP
Other DBs
NCBI-ProteinID: APF18652
UniProt: H1XT73
Position
2259834..2261045
AA seq 403 aa
MSNETLNKKLTYLPDERGYFGRFGGQYVPEILKPALDELLAAYQALKNEPQFFREFEEEL
KNYAGRPTPLYFAQNLTQYYQKARIYLKREDLAHTGAHKINNTIGQILLAKRMGKKRIIA
ETGAGQHGVATATVAAKAGLECCIYMGEQDVERQKPNVQRMKMLGAEVRPVFSGTQTLKD
ATNEAMRDWLSNVQNTHYIIGSVVGPHPFPMMVRDFQSVIGRETKEQIQEKEKRLPDYLV
ACVGGGSNAIGLFYPFLDFKSVKLIGVEAAGLGLQSGKHAASLTSGKPGIFHGMLTYLLQ
NEDGQVQLPHSISAGLDYPGVGVEHSFLKEDGRAVYTSVTDEEALKAAFLLSKLEGIIPA
LESAHALAYLEKLMPETSPQQVVVVNVSGRGDKDMETYLKYLE
NT seq 1212 nt   +upstreamnt  +downstreamnt
gtgtcgaatgaaacgttaaataaaaaactcacttacttacccgatgagcgcggctacttc
gggcgctttggcgggcaatatgtgcctgagattttaaagccggcgctggatgaattactg
gcggcctatcaggcgttaaaaaacgagccgcaatttttcagagaatttgaagaggagtta
aaaaactacgcagggcgccccacgccgttgtattttgcgcaaaatcttacccaatattat
caaaaagccagaatttatttaaaacgcgaagacctggcgcacaccggcgcgcacaaaatt
aacaacaccatcggtcaaattttgctggcgaaacggatgggcaaaaaacgaatcatcgcc
gaaaccggcgccggccagcatggcgtggccacggccacggtggcggcaaaggccggcctg
gagtgctgcatttacatgggcgagcaagatgtggaacgacaaaagcccaatgttcagcgc
atgaaaatgctgggcgccgaggtacgccccgtgttttccggcacgcaaactttgaaagac
gcgaccaacgaggccatgcgcgactggctttccaatgtgcaaaacacacattacatcatc
ggttcggtggtggggccgcacccttttcccatgatggtgcgtgattttcaaagtgtgatt
gggcgtgaaacgaaggaacagattcaggaaaaggaaaaacgcctgcccgattacctggta
gcctgtgtgggcggcggaagcaacgctatcggtctcttttatccgtttttagattttaaa
agcgttaaattaattggcgtggaggctgccggattgggattgcaaagcggcaaacatgcg
gcttcgttaacctccggaaagccgggcatttttcatggcatgctgacctatcttctgcaa
aacgaggacgggcaggtgcagctgcctcattccatttcggccgggctggattacccgggc
gttggcgtggagcacagttttttgaaggaagacggccgcgccgtttacacttccgttacg
gatgaagaagccctgaaggctgcctttttactcagtaaattggaaggcatcattccagct
ctggaaagcgcccatgcgctggcttatctggaaaaattgatgcccgaaacttctcctcaa
caagtggtggttgtcaatgtaagcggcagaggcgataaagacatggaaacctatcttaag
tatctggaatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

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