KEGG   Caldithrix abyssi: Cabys_3345
Entry
Cabys_3345        CDS       T04549                                 
Name
(GenBank) farnesyl-diphosphate farnesyltransferase
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
caby  Caldithrix abyssi
Pathway
caby00100  Steroid biosynthesis
caby00909  Sesquiterpenoid and triterpenoid biosynthesis
caby01100  Metabolic pathways
caby01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:caby00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    Cabys_3345
  09109 Metabolism of terpenoids and polyketides
   00909 Sesquiterpenoid and triterpenoid biosynthesis
    Cabys_3345
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:caby01006]
    Cabys_3345
Enzymes [BR:caby01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     Cabys_3345
Prenyltransferases [BR:caby01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   Cabys_3345
SSDB
Motif
Pfam: SQS_PSY SiaC
Other DBs
NCBI-ProteinID: APF20093
UniProt: H1XRL1
Position
3977607..3978644
AA seq 345 aa
MDKKIEYCENVLPRVSRTFAPTIRRLPKGLRLPVTVAYLLCRVADTIEDSPDLTIDQKKH
MLTLYANIFAQNDSTAYQQLLALLQHLPQQTEDEKLTHNLPILMDVFRSFSVAMQGHIAR
WVAEMSLGMRKYAQAKQKRRFSFLKSMKELDEYTYYVAGTVGYLLTELFYFYSSKITPMV
KHRLEQLAESFGKGLQLVNIIRDTAADLRRGQSYIPDELLHKYQLTRESIFKKENADRAQ
QLFNELIQDAVNHLDKALDYTLTIPKGETRIRLFCILPLFWALRTLELIQRNTLSLLGSE
KIKISKYVIRKEFFLALIHVNSNRMLRWYYNRIRSAIARPALNMR
NT seq 1038 nt   +upstreamnt  +downstreamnt
atggataaaaaaattgaatattgcgaaaatgttctcccgcgggtatcgcgcacgtttgcg
ccgactatcagaagactacccaaaggattgcgtttgcccgtaaccgtggcctatctttta
tgccgcgttgccgatacaattgaagatagccctgacttaaccatagatcaaaaaaaacac
atgctaactctctacgccaacatttttgctcaaaacgactctacagcctatcagcaattg
ctggccctgcttcagcatttgccgcaacaaaccgaagacgaaaaattaacacacaacctg
cccattctgatggatgtattccgttctttttctgtcgccatgcagggccatattgcccgg
tgggtggctgagatgtcgctgggcatgcgcaaatacgctcaggccaaacaaaaacgacga
ttcagctttttgaaatcgatgaaagagttagacgaatacacctactatgtggcaggcacc
gtcggctatctgcttaccgaattgttttacttttattccagcaaaataacgcccatggta
aaacatcgcctcgaacaactggccgaatcgtttggcaagggcctgcaactggtcaacatc
atccgcgacactgccgccgatttaagacgtgggcaatcctacattccggatgagctcctg
cacaaatatcagctaacgcgcgaaagcatctttaaaaaagaaaacgccgaccgcgctcag
cagctttttaacgagctcattcaggatgccgtcaatcatctggacaaagcgttggattac
accctgaccatccccaagggagaaacacgcattcgcctgttttgcatcttacctttattc
tgggctttgcgcactctggaactcattcaacgcaataccttatcgctgttaggttcggaa
aagattaaaatctctaaatatgtaatccgtaaagaattctttctggctctgatccatgtc
aattccaaccgcatgttgcgctggtactataaccgaattcgcagcgccattgctcgcccg
gcgcttaatatgcgttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system