KEGG   Clostridium acetobutylicum ATCC 824: CA_C1837
Entry
CA_C1837          CDS       T00056                                 
Symbol
mutS
Name
(RefSeq) DNA mismatch repair protein MutS
  KO
K03555  DNA mismatch repair protein MutS
Organism
cac  Clostridium acetobutylicum ATCC 824
Pathway
cac03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    CA_C1837 (mutS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cac03400]
    CA_C1837 (mutS)
DNA repair and recombination proteins [BR:cac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     CA_C1837 (mutS)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II AAA_14 AAA_29 AAA_27 AAA_22
Other DBs
NCBI-GeneID: 1118020
NCBI-ProteinID: NP_348461
UniProt: Q97I19
Position
complement(1988474..1991083)
AA seq 869 aa
MSISPMMQQYLSIKENHKDCILFFRVGDFYEMFFEDAEVASRELELVLTGKDCGLEKRAP
MCGVPHHAYAIYASKLVSKGYKVAVAEQLEDPSLAKGIVKRDVIKVLTPGTYTDSSFLED
TKNNYIMSLFIHDKVSAMCFADISTGEFNLTETELDFEIILNEISKFSPKELVLQENLDD
KLVDKIRERFDVVYNRFSNEYFKEHRNENLKAQFSNYAEVNMTEGLKSCANGLIKYIIDT
QKTALTHIDELQKYEIVDFLSIDINSRRNLELTETLKDKSKKGSLLWVLDKTSTAMGGRQ
IRKWIERPLIDDEKINLRLDAVEEMLTNVSYNEDLKELLKQVYDIERLAGKISSKSVNAK
EMISLRGSIEKLPAIKKLIKNFNSELLVNMENALDDLGDIYKLLYESINDNPSLSIKEGN
IIKEGYNKDIDELRLAKSHGKQWIASLENTEREVTGIKSLKVSYNKVFGYYIEITKSNLN
LVPEGRYIRKQTLTNSERYITPELKEMEEKILGAEEKLVLLEYNVFCEIRERIEKEIDRI
KGSAKILSELDCICSFADVARENNYCKPVIKRDGTLVIKEGRHPVVEKVIASGNFVANDT
VINNSDNVMMLITGPNMAGKSTYMRQVGLIVLMAQIGCFVPASAAEISICDKIFTRIGAS
DDLNAGKSTFMVEMWEVSHILKNATKNSLILLDEVGRGTSTYDGLSIAWSVIEYICKSEN
LKCKTLFATHYHELTKLEGEIEGLKNYSIAVKKVNDDIIFLRKIISKGADESYGIEVAKI
AGLPEEVLVRAREILKDLEEAKPKTAENTEDKKTNIVKEEPKKDSYQIDFNYLERESILK
ELKDTEIMDMNPIECMNKLYEFIKRAKKL
NT seq 2610 nt   +upstreamnt  +downstreamnt
atgagcatatctcctatgatgcaacagtatttatctattaaggaaaatcataaagattgt
attttgttctttagggtaggcgatttttatgagatgttttttgaggatgcagaagtcgca
tctagagaactggaattagttcttacaggtaaggattgtggacttgaaaagagggctcct
atgtgcggagttcctcatcatgcatatgctatttacgctagcaaacttgtttcaaaagga
tataaggttgcagtagcggaacagctagaagatccttctttggcaaaaggaattgtaaaa
cgagatgttataaaggtacttacacctggaacatatacagattcctcttttcttgaggat
acaaagaataactatataatgagcttgtttatacatgacaaagtttcagctatgtgtttt
gctgatatatcaaccggagaatttaacttaacagagacagaattagatttcgaaatcata
ctgaatgaaatatcaaaattttcaccaaaagaattggttcttcaggagaatttagatgat
aaactagtagataaaataagagaaagatttgatgttgtttataacagatttagtaacgaa
tattttaaagagcatagaaatgaaaatttaaaagctcaattttctaattatgccgaagtt
aatatgacagaaggattaaaaagttgtgctaatggtcttataaaatatataatagatact
caaaagactgcattaactcatatagatgaacttcaaaaatatgaaatagtggacttttta
agtatagatataaattcaagaagaaatttagagcttacggagacgcttaaagataagagc
aagaagggatctttgctttgggtccttgataaaacaagtacggctatgggtggacgacaa
attagaaaatggatagaaagacctttgatagatgatgaaaaaataaatttaagacttgat
gctgttgaagaaatgttaactaatgtatcatataatgaagatttaaaggaattgttaaaa
caggtatatgatatagaaagattggcaggaaaaatatcaagtaaaagcgttaatgcaaaa
gaaatgatatctttaagaggttctattgaaaaattgccagctataaaaaagcttattaaa
aactttaattcagagcttctagttaatatggaaaatgcacttgatgatttaggtgatatt
tataaattgttatatgaatcgataaatgacaacccctccttatctataaaagaaggaaat
ataataaaagaaggatataataaggatatagatgaattaagacttgctaaatctcatgga
aagcagtggatagcttcacttgaaaacactgaaagagaggttacgggaataaaatctctt
aaagtaagttacaataaagtatttggatattatatagagattactaaatctaatttgaat
ttggttccggaaggcagatacataagaaagcaaacacttactaatagtgaaaggtatata
acgccagagcttaaggaaatggaagaaaagattcttggagctgaagagaagctagtcctt
ttagaatataatgttttttgtgaaataagagaaagaatagaaaaagaaatagatagaata
aagggaagcgctaaaattctatcagagcttgattgtatctgctcttttgctgatgtagct
agggaaaataattattgtaaacctgtaataaaaagggatggaacattagttataaaggaa
ggaagacatcctgttgtagaaaaagttatagctagtggaaattttgtagctaatgatact
gtgataaataattctgataatgtaatgatgcttataacaggtcctaatatggctggaaag
tcaacctatatgcgccaagttggccttatagttctcatggctcaaatagggtgctttgta
ccggcaagtgcagctgaaatatctatatgtgataagatttttacaagaataggtgcatca
gatgatttgaatgcaggtaaaagtacatttatggttgaaatgtgggaagtatctcacata
cttaaaaatgcaactaaaaatagcttaatacttttagatgaagtagggcgaggaacaagt
acttatgatggtcttagtatagcttggtcagttatagagtacatatgtaaaagtgaaaat
ttaaaatgtaagacactctttgcaacccattatcatgaacttactaagcttgaaggagaa
atagaaggacttaagaattattctattgctgtaaaaaaggtgaatgatgatataatcttc
ttaaggaaaataatttcaaaaggtgcagatgaatcttatggtatagaagttgctaaaata
gcaggtcttcctgaagaagtcttagtgcgtgcaagggaaatacttaaggatttagaagaa
gctaagcctaagacagcagaaaatactgaagacaaaaaaacaaatatagttaaagaagaa
ccaaaaaaagattcatatcagattgattttaattaccttgaaagagaatctattttaaag
gaacttaaagatactgagataatggatatgaatccgatagaatgtatgaataaactgtat
gaatttataaagcgtgccaaaaaactttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (50)   
   KEGG ORTHOLOGY (1)   
   RefGene (46)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (9)   
   Pfam (9)   
All databases (65)   

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