KEGG   Cutibacterium acnes KCOM 1861 (= ChDC B594): RN83_06650
Entry
RN83_06650        CDS       T04624                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
cacn  Cutibacterium acnes KCOM 1861 (= ChDC B594)
Pathway
cacn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cacn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RN83_06650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cacn03021]
    RN83_06650
   03019 Messenger RNA biogenesis [BR:cacn03019]
    RN83_06650
Transcription machinery [BR:cacn03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     RN83_06650
Messenger RNA biogenesis [BR:cacn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     RN83_06650
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind Spore_III_AA NACHT AAA_22 AAA_25 AAA ResIII VWA_2
Other DBs
NCBI-ProteinID: ALD70798
Position
complement(1431863..1432891)
AA seq 342 aa
MAIVRRHRLRKGDVIVGQMRAHREGERREKFAPLVKIEQVNGVDPEQMKQRPEFSKLTPL
YPQERLRLEDDPKNMTGRIIDLVSPIGKGQRGLIVSPPKAGKTMIMQSIANSITRNNPEV
HLMVVLVDERPEEVTDFQRTVSGEVVASTFDRPADDHTQLSELAIERAKRLVELGHDVVI
LLDGITRLGRAYNLAAPASGRILSGGVDSAALYPPKKFFGAARNIEHGGSLTILATALVE
TGSKMDEVIFEEFKGTGNMELRLRREFANKRLFPAIDVDASGTRREELLLSREETAIMWK
LRRVLSGLEGSQALEMMLSRLRKTQTNVEFLYTISKTTPNQD
NT seq 1029 nt   +upstreamnt  +downstreamnt
atggctatagtgcgtcggcaccgcctgcgcaaaggcgacgtcatcgtcggtcagatgcgt
gctcatcgcgaaggggagaggcgtgaaaagttcgcgccgctggtcaaaatcgagcaggtt
aatggtgttgatcccgagcagatgaagcagcgtccggagttttctaagctcactccgctg
tatccgcaggaacgtctgcgtctcgaggacgaccccaaaaacatgactgggcggatcatc
gatctcgtcagtccgattggtaaaggccagcgcggtctcatcgtttcgcctccaaaggct
ggcaagacgatgatcatgcaatcgatcgcaaactcgatcactcgcaataaccccgaagtt
cacctcatggtggtgttggtcgacgagcgccccgaggaggtcactgacttccagcgcact
gtcagcggcgaggtcgtcgcatcgactttcgaccgccctgctgacgaccatactcagctg
tccgagctggccatcgagcgtgccaaacgtctcgtggagcttggtcacgacgtcgtcatc
ttgctggacggcatcactcgtctgggacgtgcgtacaacttggctgcccctgcttccggt
cggatcctttccggtggtgtcgactcagctgctctgtacccgccgaagaagttctttggc
gctgctcgtaatatcgaacacggtgggtccctgacgatcctcgccaccgctctggttgag
accgggtcgaagatggacgaggtgatcttcgaggagttcaaaggcactggcaatatggag
ttgcggctccgtcgcgaatttgccaataagaggctgttccctgctatcgacgttgacgca
tccggtactcgtcgcgaggagttgctgctatcgcgcgaggagacagcgattatgtggaag
ctgcgcagagtgctgtctggtctggaaggctcccaggctctcgaaatgatgctttcgcgg
ctacgtaagacccagacgaacgtggagttcttgtacaccatttccaagacgaccccgaac
caggattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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