KEGG   Clostridium acetobutylicum DSM 1731: SMB_G3140
Entry
SMB_G3140         CDS       T01548                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
cae  Clostridium acetobutylicum DSM 1731
Pathway
cae03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cae00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SMB_G3140 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cae03021]
    SMB_G3140 (rpoA)
   03400 DNA repair and recombination proteins [BR:cae03400]
    SMB_G3140 (rpoA)
Enzymes [BR:cae01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SMB_G3140 (rpoA)
Transcription machinery [BR:cae03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SMB_G3140 (rpoA)
DNA repair and recombination proteins [BR:cae03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SMB_G3140 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RAD51D_N PASTA DUF211
Other DBs
NCBI-ProteinID: AEI33639
Position
complement(3256505..3257452)
AA seq 315 aa
MLEIEKPKIECVESTEDGSYGRFVVEPLERGYGITLGNSLRRILLSSLPGVAANSVRIEG
VLHEFSTVKGVKEDVTELILNIKALCLKMEGEDSKVIYIDAHGPGEVTGADIRTDGSVEV
INKDLHIATLDEDGKLYMEIEVNRGRGYVTQNKNKRDDMPIGTIAVDSIYSPIKRVNFTV
ENTRVAQITDYDKLTIEVWGNGTIRPEEAISLAAKILIEHFKLFMTLTDHADDVEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTQRSMEDMMKVRNLGRKSLEEVE
QKLKALGLSLKLNDE
NT seq 948 nt   +upstreamnt  +downstreamnt
atgttggaaatagaaaaacctaaaatagaatgtgttgagtctacagaagatggttcttat
ggcaggtttgttgtagaacctcttgaaagaggatatggaattaccctgggcaattcatta
agaagaatacttctttcatctttaccaggagttgccgctaattcagtgagaattgaggga
gtacttcatgagttttcaactgttaaaggagtaaaagaagacgttacagaattgatactt
aacattaaagctttatgcctcaaaatggaaggtgaagattctaaagtaatatatatagat
gcacatggacctggagaggttacaggcgctgatataagaactgatggatctgtagaagtt
atcaataaggatttacatatagcaactctcgatgaagatggaaagctatatatggaaatt
gaagttaacagaggcagaggttatgttactcagaataagaataaaagagatgacatgcct
ataggaacaatagcagttgattcaatatattctccaatcaaaagagtgaatttcactgtt
gaaaatacaagagttgctcaaataactgattacgacaaactcaccatagaagtatgggga
aatggtactataagaccagaagaagcaattagtttggcagcaaagatacttatagagcat
tttaaattatttatgactcttacagatcatgcagatgatgtggagataatggtagaaaaa
gaagaagataagaaggaaaaggttcttgagatgactatcgaagaacttgatctttcagtt
agaagttataattgcttaaagagagcaggaataaacactgttcaagaattaactcaaaga
tccatggaagatatgatgaaagttagaaaccttggaagaaaatctttagaagaagttgaa
cagaaacttaaagctttaggattatcattaaagttaaatgatgaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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