KEGG   Citrobacter amalonaticus FDAARGOS_165: AL524_22035
Entry
AL524_22035       CDS       T04738                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
caf  Citrobacter amalonaticus FDAARGOS_165
Pathway
caf00300  Lysine biosynthesis
caf00550  Peptidoglycan biosynthesis
caf01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:caf00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    AL524_22035
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    AL524_22035
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:caf01011]
    AL524_22035
Enzymes [BR:caf01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     AL524_22035
Peptidoglycan biosynthesis and degradation proteins [BR:caf01011]
 Precursor biosynthesis
  Amino acid ligase
   AL524_22035
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase
Other DBs
NCBI-ProteinID: AMG55552
UniProt: A0A381G3N5
Position
complement(4596416..4597903)
AA seq 495 aa
MADRNLRDLLAPWVSGLPARELREMTLDSRVAAAGDLFVAVKGHQADGRRYIPQAIAQGV
AAIIAEAKDEATDGEVREMHGVPVIYLSQLNERLSALAGRFYHEPSENMRLVGVTGTNGK
TTTTQLLAQWSQLLGETSAVMGTVGNGLLGKVIPTENTTGSAVDVQQVLSGLVDQGATLC
AMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDMEHYEAAKWLLFSTHRCGQAIIN
ADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKAVEVNYHDSGATIRFSSSWGEGEIE
SRLMGAFNVSNLLLALATLLALGYPLADLLKTAARLQPVCGRMEVFSAPGKTTVVVDYAH
TPDALEKALQAARLHCTGQLWCVFGCGGDRDKGKRPLMGAIAEEFADVVVVTDDNPRTEE
PRAIIDDILAGMLDAGRAKVMEGRAEAVTNAIMQAKDNDVVLVAGKGHEDYQIVGTQRLD
YSDRVTAARLLGVIA
NT seq 1488 nt   +upstreamnt  +downstreamnt
gtggcagatcgtaatttgcgcgaccttcttgctccgtgggtatcaggtttacctgcgcga
gaactgcgagagatgacactcgacagccgtgtggctgcggcgggcgatctctttgtggca
gtgaaaggtcatcaggcggacgggcgtcgatatatcccgcaggcgatagcgcaaggtgtg
gctgccattattgcagaggcaaaagacgaggcaaccgacggtgaagtgcgtgaaatgcac
ggcgtaccggttatctatctcagccagcttaacgagcgtttatctgcgctggcgggccgc
ttttatcacgagccatctgaaaacatgcgtctggtcggcgtcaccggcacgaacggtaaa
accaccacgacccaactgctggcgcagtggagccaactgctcggcgaaaccagcgcagta
atgggcacggttggaaacggtctgctcggtaaagtgatcccaacggaaaataccaccggc
tcggccgtagacgttcagcaggtgctgtcggggctggttgatcagggtgcgactctgtgc
gcgatggaagtctcttcccacggtctggtgcagcatcgcgtcgcggcgctgaaatttgcc
gcctcggtgtttaccaatttaagccgtgaccatctggattatcatggcgatatggagcat
tacgaagccgcgaaatggctacttttctccacgcaccgttgtgggcaggcaattatcaac
gcggatgatgaagtcggtcgccgttggctggcgaaactgccggatgccgtggccgtctca
atggaagatcatatcaaccctaactgtcatggccggtggctgaaggccgtcgaggtgaat
tatcacgacagcggcgcgaccatccgcttctcctcaagctggggcgagggtgaaattgaa
agccgtctgatgggcgcgtttaacgtcagtaatctgttgctggcgctggccacgctgctg
gcgctgggctatccactggctgacttgttgaaaactgctgcgcgtctgcaacccgtttgc
gggcgtatggaagtctttagcgcgccgggtaaaaccaccgtggttgtcgattatgcccat
acccctgatgcgctggaaaaagcgctacaggcggcgcgtctgcactgcaccgggcaactc
tggtgcgtctttggctgcggcggcgatcgtgacaaagggaagcgcccactgatgggggcg
attgccgaagagttcgctgatgttgtggtcgtaacggacgacaacccgcgtactgaagag
ccgcgcgccattatcgacgacattctggcaggtatgctggatgctggtcgtgcaaaagtg
atggaaggccgtgccgaagcggtgaccaacgccattatgcaggcgaaagataacgatgtc
gtgctggtggcaggtaaagggcacgaggattaccagattgtcggtacgcagcgtctcgac
tattccgaccgcgtaactgcggcgcgcctgctgggggtgatcgcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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