KEGG   Caulobacter sp. K31: Caul_1727
Entry
Caul_1727         CDS       T00651                                 
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
cak  Caulobacter sp. K31
Pathway
cak03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cak00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Caul_1727
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cak03021]
    Caul_1727
   03400 DNA repair and recombination proteins [BR:cak03400]
    Caul_1727
Enzymes [BR:cak01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Caul_1727
Transcription machinery [BR:cak03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Caul_1727
DNA repair and recombination proteins [BR:cak03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Caul_1727
SSDB
Motif
Pfam: RNA_pol_Rpb6 DUF4865
Other DBs
NCBI-ProteinID: ABZ70856
UniProt: B0T3H0
Position
1817270..1817629
AA seq 119 aa
MARVTVEDCVEKVPNRFALVLLSAHRARGISAGASLLVDRDNDKNPVVALREIADDVVDH
EGLREQLITTLQRVDEHTEAEEEAETLALLADPTHMQMSELELVRALQSDRDGGQEERY
NT seq 360 nt   +upstreamnt  +downstreamnt
atggcccgcgtcaccgtcgaagattgcgtcgagaaggttcccaaccgcttcgctctggtc
ctgctgtccgcccatcgggcgcgcggcatctcggccggcgcctcgctgctcgtcgaccgc
gacaacgacaagaaccctgtcgtcgccctgcgcgagatcgctgacgacgtggtcgatcac
gaaggtctgcgcgagcagctgatcaccacgctgcaacgcgtcgacgagcacaccgaagcc
gaggaagaggccgaaaccctcgccctgctggccgatcccacccacatgcagatgagcgag
ctcgagctggttcgcgccctgcagagcgaccgcgacggcggtcaggaggagcggtactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system