KEGG   Candida albicans: CAALFM_C112350WA
Entry
CAALFM_C112350WA  CDS       T00189                                 
Symbol
CaO19.5229
Name
(RefSeq) exosome catalytic subunit
  KO
K12585  exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
cal  Candida albicans
Pathway
cal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CAALFM_C112350WA (CaO19.5229)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cal03019]
    CAALFM_C112350WA (CaO19.5229)
Messenger RNA biogenesis [BR:cal03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     CAALFM_C112350WA (CaO19.5229)
SSDB
Motif
Pfam: RNB Rrp44_CSD1 Rrp44_S1 PIN_4 OB_Dis3 CSD2 Dis3l2_C_term
Other DBs
NCBI-GeneID: 3642063
NCBI-ProteinID: XP_716298
UniProt: Q5A3P1
Position
1:2690712..2693726
AA seq 1004 aa
MTVSTAINNRKRLSSGLSVTSKVFVRSRNGGALKIVREHYLRNDIPCYSTICQSCQDIIK
PDAQGELPKFILSSNPTKTAKGEPHYLVLDTNIILHAIDLLENNQCFYDVIIPQTVLEEV
KNRSFPIYQRLRNLVKSEDKRFIVFHNEYNEQTYINRNKNETINDRNDRAIRKVAQWYQT
HLPSKIKTFFICNDKDNRNKAIKEGIDARSLVEYIESLPNADDLSDLIPQDDSTFENDKN
STTATAGSDDEETSFPEYYSNARIMAGIKNGTLYQGILNVSSYNYLQGEVSVPAFKKPLL
IQGSKNLNRAFNSDSVIVELLPKDKWKEPSTTIIEEGAIGANDNAADGDDEEGGGGDVIE
GTKSVISDKERILLAQEAIKVIGSKNEDKRLQPTAKIVGVMRRSWRYYVGQIAPSSVNLD
DKTGHASRSCFVILMDPKLPKIRIRTRKAREYLGQRIVVVVDSWPINSRYPNGHFVRALG
EIESAEAETEALLLEHDVEYRPFSKNVLDCLPKEGDNWVVPDITNNTEDPQLQKRVDLRD
KLVCSIDPPNCVDIDDALHAKQLPNGNYEVGVHIADVTHFVKPNTPLDQEGASRGTSVYL
VDKRIDMLPQLLGTNLCSLKPFVDRFAFSVIWEVDEDANIVNVNYMKSIIKSRQAFSYEQ
AQLRIDDPSQQDDLTKSMRILLKLSKKLKQKRLDAGALNLASPEVKVHMDSETSDPQEVE
IKKLLETNSLVEEFMLFANISVARKIYDAYPQTAMLRRHAAPPATNFETLNDMLNVRKNG
MSISLESSKALADSLDRCIDPNDKYFNTLVRIMSTRCMMAAEYFPSGSYGYPEFRHYGLA
VDIYTHFTSPIRRYCDVVAHRQLAGAIGYENLDLSHRDKSKMEMIVRNINKRHRNAQFAG
RSSIEYYVGQVMRNNESEHEGYIIKIFNNGIVVLVPKFGVEGLIKLENMGDVNSANYNED
KYELTFTDFKGNERTIAVFDKVKVDVKSVKDEISGKRKAQLMLK
NT seq 3015 nt   +upstreamnt  +downstreamnt
atgacagtatcaacagcaattaataataggaaacgattatctagtggattaagtgttact
tcaaaagtatttgtccgttcaagaaatggtggagcattaaaaattgttcgtgaacattat
ttaagaaatgatattccatgttattccaccatttgtcaatcatgtcaagatataattaaa
cctgatgctcaaggtgaattaccaaaatttatcttatcactgaatccaacgaaaactgct
aaaggtgaaccacactatttggtgttagataccaatattatcttacatgccattgattta
ttagaaaataatcaatgtttttatgatgtaattatcccacaaacagttttagaagaagtg
aaaaatcgttcattccctatatatcaaagattaagaaatttggttaaatcggaagataaa
cgttttattgttttccataatgaatataatgaacaaacatatattaatagaaataaaaat
gaaactattaatgatagaaatgatcgagccattagaaaagtagcacaatggtatcaaact
catttaccatccaaaattaaaacttttttcatttgtaatgataaagataatagaaataaa
gccattaaagaaggtattgatgcaagatcattagttgaatatattgaaagtttaccaaat
gctgatgatttaagtgatttaatccctcaagatgattctacatttgaaaatgataaaaat
agtactaccgctacagctggtctggatgatgaagaaacttcattcccggaatattattca
aatgcaagaataatggcaggtattaaaaatggtactttatatcaaggtattttgaatgtt
tcatcttataattatttacaaggtgaagttctggttcccgcatttaaaaaacctttatta
attcaaggatcgaaaaatttgaatcgtgcattcaattccgattcagttattgttgaatta
ttaccaaaagataaatggaaagaaccatcaactaccattatcgaagaaggagctattggt
gccaatgataatgccgcagatggtgatgatgaagaaggtggcggtggtgatgttattgaa
ggtaccaagagtgtgatttcagataaagaacgtatattattagctcaagaagctataaaa
gttattggttcaaaaaatgaggataaaagattacaaccaacagctaaaattgttggagta
atgagaagatcatggagatattatgttggacaaattgctccatcatcagtgaatcttgat
gataagactggacatgcttcaagaagttgttttgttattttaatggatcctaaattacct
aaaattagaattagaactaggaaagctagagaatatttaggacaacgaattgttgttgtg
gttgattcttggccaattaattcaagataccctaatggacattttgttagagctttaggt
gaaattgaaagcgctgaagcagaaactgaagcattattattggaacatgatgttgaatat
agaccatttctgaaaaatgtattggattgtttaccaaaggaaggtgataattgggtagtc
ccagatatcactaataatactgaagatcctcaattacagaaaagagttgatttgagagat
aaattagtttgttcaattgatccaccaaattgtgtggatattgatgatgccttacatgct
aaacaattacctaatgggaattatgaagttggagtccatatagccgatgtcactcatttt
gttaaaccaaacactccattagatcaagaaggtgcctctagaggaacttcggtatatttg
gttgataaaagaattgatatgttgcctcaacttttaggaacaaatttatgttctttaaaa
ccatttgttgatagattcgcttttagtgttatttgggaagttgatgaagatgccaatatt
gtcaatgtcaattatatgaaatcaattattaaatcaagacaagcattttcttatgaacaa
gctcaattacgtattgatgatccatcacaacaagatgatttaactaaatcgatgagaatt
ttattaaaattatcgaaaaaattaaaacaaaaaagattagatgccggggcattgaattta
gcatcacctgaagttaaagtacatatggatagtgaaacttctgatccacaagaagttgaa
attaaaaaattattagaaacaaattctttagtagaagaatttatgttgtttgccaatatt
tctgtcgcaagaaagatttatgatgcttatccacaaacggctatgcttagacgtcatgca
gcacctccagcaactaattttgaaactttaaacgacatgttaaatgttcgtaaaaatggt
atgtcgatttcattagaatcgtcaaaggcattggcagattctttggatagatgtattgat
cctaatgataaatatttcaatacgttggttcgtattatgtcgactcgttgtatgatggca
gcagaatacttccctagtggatcttatggataccccgaatttagacattatgggttagcc
gttgatatatatactcatttcacttcccccatcagaagatattgtgatgttgttgctcat
aggcaattggccggtgctataggttatgaaaatttagatttaagtcatcgtgataaatct
aaaatggaaatgattgttagaaatatcaataaacgtcatagaaatgctcaatttgctgga
agatcaagtatagaatattatgtgggccaagtcatgagaaataatgaatctgaacatgaa
ggttatattattaagattttcaataatggtattgtggttttagtgccgaaatttggtgtt
gaaggattaattaaattagaaaatatgggtgatgtcaattcagcaaattataatgaagat
aaatatgaattgacatttaccgattttaaaggtaatgaaagaacaattgctgttttcgat
aaagttaaagttgatgttaaatcagtgaaagatgaaattagtggtaaaagaaaagctcaa
cttatgttaaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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