KEGG   Candida albicans: CAALFM_C205690CA
Entry
CAALFM_C205690CA  CDS       T00189                                 
Symbol
YTH1, CaO19.6881
Name
(RefSeq) cleavage polyadenylation factor RNA-binding subunit
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
cal  Candida albicans
Pathway
cal03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cal00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    CAALFM_C205690CA (YTH1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cal03021]
    CAALFM_C205690CA (YTH1)
   03019 Messenger RNA biogenesis [BR:cal03019]
    CAALFM_C205690CA (YTH1)
Transcription machinery [BR:cal03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     CAALFM_C205690CA (YTH1)
Messenger RNA biogenesis [BR:cal03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     CAALFM_C205690CA (YTH1)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_2 zf-CCCH_3 zf-CCCH_4
Other DBs
NCBI-GeneID: 3645572
NCBI-ProteinID: XP_712810
UniProt: Q59T36
Position
2:complement(1164030..1164677)
AA seq 215 aa
MLQSNPVIHPNTSNRHFKFEPFLRQEYNFGLDPDRPVCQFYNPLNPDNSCPQGNNCPNKH
VSAMYSNKIVCKHWLRGLCKKGDHCEFLHEYNLRKMPECLFYSKNGYCTQTSECLYLHVD
PQSKIPECLNYNQGFCSEGPNCKNRHVRRVLCPLYLYGFCPKGPECEFTHPKFDFHNLNL
RIRPDNLIQMTSKHVDNSKEESDKKEDSEPKEESI
NT seq 648 nt   +upstreamnt  +downstreamnt
atgctacagctgaatccagtaatacatccaaatacatcaaacagacattttaagtttgaa
ccatttttacgtcaggaatataattttggtcttgatcctgatcgtccagtatgtcaattc
tacaacccattaaatcctgacaattcttgtccccagggcaacaactgtcctaataaacac
gtatctgcaatgtattccaataagattgtttgtaaacattggttaagaggattatgtaaa
aagggtgatcattgcgagttcttacatgaatacaatttaagaaaaatgcctgaatgtttg
ttttattccaaaaatggctactgtactcaaacatcagagtgtttgtatctacatgttgat
cctcaactgaaaataccagaatgcttaaactataatcaagggttctgtagtgaaggtccc
aattgtaagaatcgtcatgtcagacgagtgctatgcccgttatatctttatggattctgt
ccaaaaggccctgaatgtgaatttactcatcccaagtttgatttccataatttgaattta
agaattagacccgataatttgatacaaatgacaagtaaacatgtggataattcaaaggaa
gaatcagataagaaagaagattcagaaccgaaggaagaaagtatatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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