KEGG   Calothrix sp. PCC 7507: Cal7507_1739
Entry
Cal7507_1739      CDS       T02358                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
calo  Calothrix sp. PCC 7507
Pathway
calo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:calo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Cal7507_1739
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:calo03400]
    Cal7507_1739
Enzymes [BR:calo01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Cal7507_1739
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Cal7507_1739
DNA repair and recombination proteins [BR:calo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Cal7507_1739
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N
Other DBs
NCBI-ProteinID: AFY32196
UniProt: K9PGW6
Position
complement(1883418..1884269)
AA seq 283 aa
MPELPEVETVRRGLNQLTLNREITGGDVLLDRTIAHPFSVGEFIHGIKGSAIATWHRRGK
YLLAELTPSSPSSANGWLGVHLRMTGQLLWLHRDEPLHKHTRVRLFFGDEQELRFVDQRT
FGQMWWVPPNVVVETIITGLGKLAADPFSPEFTVDYLAQKLQNRHRPIKTALLDQSVVAG
LGNIYADEALFKSGILPETLCTNLERSQIERLRIAIIQVLEASIAAGGTTFSNFLNVKGV
NGNYGGVALVYNRTGEPCRVCGNLIQRIKLGGRSSHFCSQCQQ
NT seq 852 nt   +upstreamnt  +downstreamnt
atgcctgaactgcctgaagtagaaacagtccggcggggtctaaatcaattgaccctcaat
cgagaaatcacgggtggtgatgtgttgcttgatcgcacgatcgcccacccgttttctgtt
ggtgagtttattcatggaattaaagggagcgccatcgctacttggcatcgtcgcggcaaa
tatctcctcgccgaactcaccccatcctccccctcctctgccaacggctggctaggcgtg
catctccgaatgacaggtcaactactgtggttacatcgagatgaaccattacacaagcac
acgcgggtaagattattttttggggatgaacaggaattgcgttttgttgatcagcgcacc
tttggtcaaatgtggtgggtaccgccaaatgtggtcgtggaaactatcattactggttta
ggtaaactcgcagcagatccattttcaccggaattcactgttgattatttggcgcaaaaa
ctgcaaaatcgccaccgtccaattaagacagcgctgttggatcagtccgtcgtggcgggg
ttaggtaatatctatgccgacgaagcgctgttcaagagtggaattctaccagaaactctc
tgtacaaatttagagcgatcgcaaattgagcggttacgaattgcgattattcaagtatta
gaagccagtattgccgcaggtggcacgacttttagtaattttctcaatgtcaaaggtgtc
aacggtaactatggcggtgtagccctagtctataaccgcactggagaaccctgtagagtt
tgtggcaacttaatacagcgaattaagttaggtggccgttctagtcacttttgttcccag
tgtcagcaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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