KEGG   Calothrix sp. PCC 7507: Cal7507_3497
Entry
Cal7507_3497      CDS       T02358                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
calo  Calothrix sp. PCC 7507
Pathway
calo03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:calo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Cal7507_3497
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:calo03021]
    Cal7507_3497
   03400 DNA repair and recombination proteins [BR:calo03400]
    Cal7507_3497
Enzymes [BR:calo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Cal7507_3497
Transcription machinery [BR:calo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Cal7507_3497
DNA repair and recombination proteins [BR:calo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Cal7507_3497
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 zf-ZPR1 HHH_2
Other DBs
NCBI-ProteinID: AFY33892
UniProt: K9PN04
Position
complement(3993553..3994500)
AA seq 315 aa
MAQFQIECVESSTEESRSHYSKFVLEPLERGQGTTVGNALRRVLLSNLEGTAVTAVRIAG
VSHEFATVPGVREDVLEILMKMKEVILKSYSSQPQIGRLLVNGPTTVTAAHFDLPSEVEV
IDPTQYVATLAEGGKLEMEFRIEKGKGYRTVERGREEATSLDFLQIDSVFMPVRKVNYSV
EEARGEGSITKDRLLLEVWTNGSVSPQEALSSAAGILVDLFNPLKDISLEPTDTGSDIPD
DPTAQIPIEELQLSVRAYNCLKRAQVNSVADLLDYTQEDLLEIKNFGQKSAEEVVEALQR
RLGITLPQERGSKHT
NT seq 948 nt   +upstreamnt  +downstreamnt
gtggcgcaatttcaaattgaatgtgtagagtcaagtactgaagaaagtcgaagccattat
agtaaatttgtcctcgaacctctagaacgtggacaaggaacgacagttggcaacgcattg
aggcgagttttactgtctaatctagagggtacagcagttacagcagttaggattgcgggc
gtttcacacgagtttgccacagttccaggcgtgcgagaagacgtactggaaatcctcatg
aaaatgaaggaagtcatcctcaaaagctattcctctcaaccccagattggtcgcttgctc
gttaacggtccgacaacagtcactgcggcacattttgatttacccagtgaagtagaagtc
atcgacccgacccagtatgtagccactctagcggaggggggcaaactggaaatggaattt
cggatcgaaaaaggtaaaggttatcgcactgtagaacggggacgagaggaagccacatct
ttggactttctgcaaatcgactcagtgtttatgccagtcagaaaagttaactatagcgtc
gaagaagcccgtggtgaaggttccatcactaaagatcgactgctattagaagtttggaca
aatggtagtgtctccccccaagaagcactatcatcggctgcgggaattctcgtagattta
ttcaacccgttgaaagatatctcactggaaccaacggataccggctcagatattccagac
gatcccaccgcccaaattcccatcgaagagttacagctttctgtacgggcatataactgt
ctcaaacgagcgcaagttaactctgtagccgacttattggattacacccaagaagacctg
ttagaaattaaaaactttggtcagaagtcagcagaagaggttgttgaagctttacagcga
cgcctaggtatcaccctaccccaagaaagaggctccaagcacacctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system