KEGG   Cicer arietinum (chickpea): 101498481
Entry
101498481         CDS       T02819                                 
Name
(RefSeq) DNA mismatch repair protein MSH6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
cam  Cicer arietinum (chickpea)
Pathway
cam03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    101498481
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cam03400]
    101498481
DNA repair and recombination proteins [BR:cam03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     101498481
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor
Other DBs
NCBI-GeneID: 101498481
NCBI-ProteinID: XP_004494416
UniProt: A0A1S2XVQ6
Position
Ca3:complement(36780148..36789265)
AA seq 1301 aa
MSSSRRNINGRSPLVNPQRQITAFFTKTPSPSPSPIPSPTLSKSNPKIKPNPNPTPSLTT
PSPLNPKQHKPKPLLIIGASPTPPQPSPSPSPFADQVIGKRIKVYWPIDDAWYEGFVKSF
DKLTSKHRIHYDDDEEESIDLSKEKFEWIQERSSKKLKRLRRGSSPIRKMVIEENVVEDS
PKEEKEEHDDDDDNDNDNDNDNDDSDDEDWGKNAVLEDVGDDDDEEEMELEDENDVAAES
VKGKTNGKVEPKKRKLGEAAKSEPAKKSRSGTEVNRVAVKLSPLEHVNNLEVKKTSDGAD
NVPTGDASERFASREAQKFRFLREDRKDANRRHPGDENYDSRTLYVPPDFLRSLTEGQRQ
WWDFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELTLQYMKGEQPHCGFPERNFSTNVEK
LARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVRREICAVVSKGTLTDGEFMSANPEAA
YLMALTEHHGNHPNEMSERTYGVCVVDVTTSRVIIGQFNDDSECSHLCCILSEIRPVEIV
KPAKILSAETERVLLKHTRNPLVNELIPIVEFWDADKTVDQLKRIYGHNNDVSDQDGGLD
CLPDVLLELVKTGHNSRSALSALGGALYYLKQAFLDEQLLRFAQFELLPCSVFSGFASKP
YMVLDAAALENLEIFENSRNGESSGTLYAQLNQCVTAFGKRLLKSWLARPLCHVESIKER
QEAVAGLKGVNLPHALEFRKELSKLPDMERLLARVFSTSDASGRNANKVVLYEDASKKQL
QEFISALRGLEVMAQACLSLSVILNDVKSRQLSHLLTPGKGLPDVCMDLNHFKDAFDWVE
ANNSGRIIPHEGADIEYDSACKAVKEIESSLLKHLKEQRKLLGGTSISYVNIGKDTYLLE
VPENLCQNIPRDYELRSSKKGFSRYWTPDIKSLLRELSGAESERESLLKSTLQRLIGRFC
EHHTQWKQLVSATAELDVLINLAIASDYYEGPKCRPSFVGTLCTNEAPYLYAKSLGHPVI
RSDSLGKGAFVPNDITIGGPDHASFILLTGPNMGGKSTLLRQVCMAVILAQVGADVPAES
FELSPVDRIFVRMGARDNIMAGQSTFLTELSETATMLSSATRNSLVALDELGRGTSTSDG
QAIAESVLEHLVRRVQCRGLFSTHYHRLAIDYLKDPKVCLCHMACQVGSGIEGLDEVTFL
YRLTLGACPKSYGVNVARLAGLPTSVLQKAAAKSREFEASYGKCRKGSSETNSLNQSWVD
EIIVIIQKLNNTATNLSCQETVCDPSLRKLQRKARKLLQRC
NT seq 3906 nt   +upstreamnt  +downstreamnt
atgtcttcctcccgtcgcaatatcaatggccgatcacccctcgtcaatccacagcgtcaa
atcaccgccttcttcaccaaaaccccttccccttccccttcccctattccttctcctact
ctctccaaatccaaccccaaaataaaacctaaccctaaccctactccttcccttactaca
ccttcccctctcaatcccaaacaacacaaacccaaaccccttctcataatcggcgcttct
cctacaccgccacaaccttctccttctccttctcccttcgctgatcaagtcattggcaaa
aggatcaaagtttattggcctattgacgatgcttggtacgaaggtttcgtcaaatcattt
gataagcttacctccaagcatcgtattcactacgacgatgacgaagaggaatccatcgac
ctttccaaggagaaattcgaatggattcaggaacgttcttcgaagaagcttaaacggctt
cgtcgcggttcttcccctatcagaaaaatggtgattgaggagaatgttgtagaagatagt
cctaaagaggaaaaagaagaacatgatgatgatgatgataatgataatgataatgataat
gataatgatgattcagatgatgaagattgggggaagaatgctgtattggaggatgttggt
gatgatgatgatgaagaagaaatggagctggaggatgaaaatgatgttgctgcagagagt
gttaaaggaaagactaatggcaaggttgaacccaaaaagcggaaactaggtgaagcggcg
aaatcagagcctgcaaaaaagagcagaagtggaactgaagttaatagggtagctgttaag
ctctcaccattggagcatgtgaataatttggaggttaaaaagacatctgatggtgctgac
aatgttccaactggtgatgcctctgaaagatttgcgtcccgcgaagctcagaagtttcgc
tttctgagagaagatcgcaaggatgccaaccgaagacatccaggagatgaaaattatgat
tcaagaactctctacgtgcctccagatttcttgaggagtttgaccgaaggccagagacaa
tggtgggacttcaagtcaaaacacatggacaaagttttgtttttcaagatgggtaaattt
tatgagctttttgaaatggatgcacacgtaggagcaaaagagcttaccttgcagtatatg
aagggagagcaacctcattgtggatttccagagaggaatttctcaactaatgtggagaaa
ctagctaggaagggttatcgagttcttgttgtagagcagactgaaacacctgaacagctg
gagcttcgtcgcaaggagaagggctctaaagataaggttgtgagacgggaaatatgtgcc
gtggtgtcaaaaggcacattaacggatggggagttcatgtcagcaaatcccgaagctgca
tatttaatggcactgactgagcaccatgggaaccatccaaatgaaatgtcagagcgcacc
tacggtgtttgtgtggttgatgttaccacaagcagagtcattattgggcagttcaacgac
gactcggagtgcagtcacttatgctgtatcttgtctgagatcagaccggttgaaattgta
aaacctgctaaaatactcagtgctgaaacagaaagggtactgctgaaacacaccagaaac
cctctagtgaatgaattaattccaattgtggaattctgggatgctgacaaaactgtagat
caattaaagagaatttatgggcacaataatgatgttagtgatcaagatggtggattagac
tgtctgccagatgttttactggagctcgtgaaaacaggtcataatagcagaagtgcactt
tcagcccttggcggtgctctctattatttgaaacaggctttcctagatgagcagttgctt
agatttgcacagtttgagttgcttccatgctctgttttcagtggttttgcttcaaaacca
tacatggttcttgatgcagcagccttggagaatcttgagatttttgagaatagcagaaat
ggagagtcttcaggcacgctctatgctcaattaaaccaatgtgttacggcatttgggaag
agactgctaaagtcatggcttgcaagaccattatgtcatgtggaatcaattaaggaacgc
caggaagctgttgcaggtttaaagggagttaatctacctcacgcactagaatttcgaaag
gaattatcaaagctacctgacatggagcggttgctcgcacgggtgttctctactagtgat
gctagtggaagaaatgctaataaagtggttctgtatgaggatgcatcaaagaaacagctg
caagagtttatttcagctctgcgtggtcttgaagtaatggcacaagcttgcttgtcactt
agtgtcattttgaatgatgtcaaatctagacaacttagtcatcttttaacacctggtaaa
ggtcttcctgatgtttgcatggatctgaatcatttcaaggatgcctttgattgggtggaa
gccaataactccggccgaataatacctcatgaaggagctgacatagagtatgattcagct
tgtaaggcagttaaagagattgagtccagtttattaaagcatctcaaggaacagaggaaa
ttacttggaggcacatcaatctcttatgtcaatattggaaaggacacatacctattggaa
gttccggaaaacttgtgtcagaatattcctcgggattatgagttgcgttcatccaaaaaa
ggattctcaaggtattggactccagatattaaatcgcttttgagagagctctcgggagct
gaatctgaaagggagtccttattgaaaagtacattgcagagattgattgggcgtttttgt
gaacatcacacccagtggaagcagctggtgtctgcaactgctgaactggatgttttgatc
aatttagctattgccagtgattactatgaaggaccaaaatgcagaccgagttttgttggc
accttatgtacaaatgaagctccatacctctatgctaaaagcctgggacacccagttatt
aggagtgattccttaggaaagggtgcatttgtacctaatgacataacaattggtggtcca
gatcacgcctcctttattcttcttacaggtcctaacatgggtgggaagtcaacccttctt
cgccaagtttgcatggctgtgattttggcccaggtaggggcagatgtccccgcagaaagt
tttgagttgtctcctgtggaccgaatttttgttcggatgggcgcccgagataatatcatg
gctggccaaagtacatttttaactgagctttcagaaactgcaacaatgctgtcatcggca
actcgtaattcgttggtggctctggatgagcttgggcgagggacctcaacatctgatgga
caagccattgcggaatcagtattagaacatcttgtacgtagggtgcagtgtcgtggattg
ttttctacacattatcatcgattggctatagattatctcaaagatcccaaggtctgtctc
tgtcacatggcatgccaagttggtagtggaattgaaggtttggatgaagtcacctttctt
tacaggctgacccttggtgcttgccccaagagctatggtgttaatgttgctcgattagct
ggactaccgacctctgtgcttcagaaggctgctgccaagtctagagaatttgaggcctct
tatggtaaatgcagaaaaggatcttctgaaacaaattctttgaatcaaagttgggttgat
gagataatagttatcatacaaaaattgaacaatactgctacaaatttgagttgccaggaa
actgtttgtgatccttccctaagaaaacttcagcgtaaggcgagaaaactgctacaacga
tgctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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