KEGG   Cicer arietinum (chickpea): 101502456
Entry
101502456         CDS       T02819                                 
Name
(RefSeq) polyadenylate-binding protein 2-like
  KO
K13126  polyadenylate-binding protein
Organism
cam  Cicer arietinum (chickpea)
Pathway
cam03015  mRNA surveillance pathway
cam03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cam00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101502456
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101502456
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cam03019]
    101502456
   03041 Spliceosome [BR:cam03041]
    101502456
Messenger RNA biogenesis [BR:cam03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     101502456
   mRNA cycle factors
    Stress granule specific factors
     101502456
Spliceosome [BR:cam03041]
 Complex C
  Other components
   Complex C specific factors
    101502456
SSDB
Motif
Pfam: RRM_1 PABP RRM_occluded RRM_3 RRM_7 YflT MARF1_RRM1 SET1_RBD BscB_a-b DUF5062
Other DBs
NCBI-GeneID: 101502456
NCBI-ProteinID: XP_004499044
UniProt: A0A1S2Y424
Position
Ca4:46429324..46435127
AA seq 648 aa
MAQVQVQHQTPAAVSAPSNGVVAAPNPNFVTTSLYVGDLDLNVSDSQLYDLFNQVGQVVS
VRVCRDLASRRSLGYGYVNFSNPQDAATALEMLNFTPLNSKSIRVMYSHRDPSIRKSGTA
NIFIKNLDKTIDHKALHDTFSTFGHILSCKIATDGSGQSKGYGFVQFDTEESAQNAIDKL
NGMLINDKQVYVGHFLRKQDRDNVFSKTKFNNVYVKNLSESFMEDELRKVFGEYGTITSA
VLMRDADGRSKCFGFVNFEDPDDAANAVEALNGKKFDDKEWYVGKAQKKSERELELKGRF
EQTVKESVDKFQGVNLYLKNLDDSISDEKLKEMFSEFGTIASYKIMRDPNGVSRGSGFVA
FSTPEEASRALGEMNGKMIASKPLYVAVAQRKEDRRARLQAQFSQMRPVAITPSVAPRMP
LYPPGAPGLGQQFMYGQGPPAMIPPQAGFGYQQQLVPGMRPGGGPMPSFFVPMVKQGQQG
PRPGGRRGAGPGQQPQPQGPMMQQQMIPRQRIYRYPPGRNMQDVPLQGVAGGMMSVPYDM
GGLPIRDAVGQPMPIQALATALANAPSEQQRTMLGEALYPLVDQLEHDAAAKVTGMLLEM
DQPEVLHLIESPDALKAKVAEAMDVLRNVAQQPADQLATLSLNDTLVS
NT seq 1947 nt   +upstreamnt  +downstreamnt
atggctcaggttcaggttcagcatcaaactcccgccgccgtgtcggctccttcgaacggc
gtggttgccgcaccgaacccgaacttcgttacgacgtcattgtacgttggtgaccttgac
ctaaatgtcagcgattctcagctttacgatctgttcaatcaggttggccaagtcgtttcg
gttagggtttgtagggatttggcttcgcgtcgttcacttggttatggttatgttaatttc
agtaaccctcaggatgcggctacggctttggaaatgctgaattttactccactgaacagc
aaatccattagggttatgtattctcatcgggatcctagtattaggaagagtggtactgca
aatatttttatcaagaatttggataagacaattgatcacaaagctttacatgatactttt
tctacttttggacatattttatcttgcaaaatagctactgacggttcgggtcagtctaaa
ggttatggttttgttcaatttgacactgaggaatctgctcagaatgcaattgataagttg
aatggcatgctgatcaatgataaacaggtgtatgtgggtcatttcctacgtaagcaagat
agagataatgtttttagtaagacaaaatttaataatgtctacgtgaaaaacctatctgag
tcattcatggaagatgagttgagaaaagtatttggagagtatggcaccattactagtgct
gttttgatgagagatgcagatggtaggtcaaagtgttttggttttgtcaatttcgaagat
ccagacgatgctgctaatgctgtggaggcattgaatggaaagaaatttgacgacaaggag
tggtatgtgggaaaagctcagaaaaaatctgaacgggagcttgagctgaaaggtcggttc
gagcagactgttaaggaatctgtagacaaatttcaaggtgtaaatttgtatctcaagaat
ttggatgattccattagtgatgaaaagctcaaagaaatgttctctgagtttggcacaatt
gcttcatacaagattatgcgagatccaaatggagtcagtagaggatcaggatttgttgca
ttttcaactcctgaggaagcatcaagagctcttggagagatgaatggtaaaatgattgcc
agcaaacctctttatgttgctgttgcacagaggaaagaagatagaagagcaaggttacag
gcacaattttcacaaatgaggcctgttgcaattacaccttctgttgcaccccgaatgcca
ctctaccctcctggtgctcctggtcttggacaacaatttatgtatgggcaggggcctccg
gccatgattcctccacaagctggatttggatatcagcagcagcttgttcctggaatgaga
cctggtggtggtccgatgccaagtttctttgttccaatggttaagcagggccaacaaggc
cctcgcccaggtgggcgccgcggagctggtcctggtcaacaaccccagccgcaagggcca
atgatgcagcagcagatgattccaaggcaacgcatttatcgctaccctcctggccgcaac
atgcaagatgtccctcttcaaggagttgctggaggaatgatgtccgtcccatatgacatg
ggtggtcttccaatccgtgatgctgtaggccaaccaatgcccattcaggctttggctaca
gcactcgcgaatgctccctccgaacaacagaggactatgcttggggaggctttgtatccg
cttgtagatcagctggaacatgatgcagcagctaaggttactggcatgcttttggaaatg
gaccagcctgaagtgttgcatctgattgaatcaccagatgctctcaaggccaaagttgcg
gaagccatggatgtgcttagaaatgttgctcaacaaccggcagatcaactagccacactc
tctctcaatgacacccttgtgtcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (25)   

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