KEGG   Cicer arietinum (chickpea): 101509841Help
Entry
101509841         CDS       T02819                                 

Definition
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Organism
cam  Cicer arietinum (chickpea)
Pathway
cam03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101509841
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cam03041]
    101509841
Enzymes [BR:cam01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     101509841
Spliceosome [BR:cam03041]
 Complex C
  Other components
   Step II factors
    101509841
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: HA2 OB_NTP_bind Helicase_C S1 DEAD AAA_22 AAA_19 AAA_30 T2SSE DUF2075 Sigma54_activ_2 AAA_16 Flavi_DEAD AAA ABC_tran AAA_14 PhoH
Motif
Other DBs
NCBI-GeneID: 101509841
NCBI-ProteinID: XP_004498155
UniProt: A0A1S2Y273
Position
Ca4
AA seq 1178 aa AA seqDB search
MGAEIPQDGLKKLEYLSLVSKVCTELESHTGAGDKVLAEFITDLGHSSETVEEFDAKLKE
NGAEMPDYFVRTLLTIIHAILPPKPKKGKEIQKENSTSKTKFKALAISDDRDRAKELRNE
IETEAREKQKQKEPDRYEKYRNEDDDGGGYRDRDRRDRRRDGYDRDDRRDYRRGNDRDRD
RDRDRDRYERRRKDEYQEYEGGREENGDEKGRRDSRHGGSGEPELYMVYKGRVSRVMDTG
CFVQLDDFRGKEGLVHVSQIATRKIVNAKEVVKRDQQVYVKVISVSGSKLSLSMRDVDQH
TGKDLLPLKKSSEEEAFRTNPQDSKDGPVARTGLSGIRIVEEDDVGSSRRPLKRMSSPER
WEAKQMIASGVLSVSEYPTYDEEGDGVMYQEEGAEEELEIEMNEDEPAFLQGQSRYSMDM
SPVKIFKNPEGSLGRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPESGER
HLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIHKLKKELIQAVHD
NQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGE
EVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVVMLDEAHERTIHTDVLFGL
LKQLVKRRPEMRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDAS
LITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEM
QSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPIS
QASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGMTTLNMKAMGINDL
LSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLG
CSDEILTIIAMIQTGNIFYRPREKQAQADQKRARFFQPEGDHLTLLAVYESWKNKNFSGP
WCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKTRKAITAGFFFHAARKDP
QEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRF
FKVSDPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA
NT seq 3537 nt NT seq  +upstreamnt  +downstreamnt
atgggtgccgaaattccacaagacggattgaagaaactcgagtacctatcacttgtatcc
aaagtatgcaccgagttagaatcccatactggagctggcgacaaggttctcgccgagttt
attaccgatttaggtcactcatcggaaaccgtcgaggaattcgacgctaaactcaaagaa
aacggcgccgagatgcctgattactttgtccgaacacttctcaccataatccacgctatt
cttcctccgaaacctaagaaggggaaagagattcagaaagagaattccacctcgaagaca
aaattcaaggcgttggcgatttcagacgatagggatcgtgccaaggagcttcggaacgag
atcgaaaccgaagctagagaaaaacagaaacaaaaggaaccagacaggtatgaaaaatat
aggaatgaggatgatgatggtggtggttatagagatagggatagaagagataggcgaaga
gatgggtatgatagagatgatagaagggattatagaagggggaatgatagagacagagat
agggatagggatagggatcggtacgagaggcgaaggaaagatgagtatcaagagtatgaa
ggtggaagggaggaaaatggtgatgagaaaggtcgtagagattcgaggcatggtggttca
ggtgaacctgagttgtatatggtttataaaggaagagtgtctagggtgatggatactggg
tgttttgttcagttggatgattttagagggaaggagggtttggttcatgtttctcagatt
gctactaggaagattgttaatgctaaggaggttgttaaaagggatcaacaggtttatgtc
aaggtgatatctgtttctggttcgaagttgagtctttccatgagagatgttgatcagcat
accgggaaggatcttcttccattgaagaagagctcggaggaagaggcttttcggacgaat
ccacaggattcaaaggatgggccagttgctaggacagggctttctgggatcagaattgtg
gaggaggatgacgttggttcttcgcgcaggccgctgaagagaatgagctctcctgagaga
tgggaagcaaaacagatgattgcttcgggggttttgagtgtttcggagtatccgacttat
gatgaggagggagatggagtcatgtaccaagaagaaggtgctgaggaagagcttgagatt
gaaatgaatgaggatgaacccgccttcttgcaagggcagagtagatactcaatggatatg
tctcccgttaagatatttaagaatccagaaggttctctaggtcgcgcggctgcactccaa
tctgctcttataaaggaacgaagggaagtaagagaacagcagcaacgtaccatgcttgat
tcaattccaaaggatctcaatcgtccttgggaagaccctatgccagagtcaggtgaaagg
catcttgcccaagagttgagaggtgttggcttatcggcctacgatatgccagaatggaag
aaggatgcctatgggaaaaccattacttttgggcaaaggtcaaagctttctattcaggaa
cagaggcagagtttgccaattcacaagttaaaaaaagaattgattcaggctgtccatgac
aatcaggtcttggttgtgattggtgaaaccggttcgggtaaaactactcaggtcacacag
tatcttgctgaagcgggttacaccacaagaggtaaaattggatgtactcaaccccgtagg
gtggctgcaatgtcagttgcaaagagagttgcagaagagtttggctgtagattaggagag
gaggttggttatgccattcggtttgaggattgcactggacctgatactgtaatcaagtac
atgaccgatggtatgcttcttagggaaatattggttgatgagaatctgtcacagtattct
gttgtaatgcttgatgaagcccatgagagaactattcacactgatgttcttttcggactg
ctgaagcagctggtgaagcgtagacctgagatgcgattgattgtcacatctgctactctt
gatgctgaaaaattttcaggatatttctttaactgtaacatctttacaattcctgggaga
acttttcctgtggagatactttatactaaacagccagaaagcgattacttggatgcatct
ctgatcactgtcctgcagatccacttgacagaacctgaaggagacattcttctcttctta
actggtcaggaggagattgattttgcttgccagtctctctatgagagaatgaagggatta
ggtaagaatgtcccagagctgatcattttacctgtttatagtgcccttcctagtgaaatg
caatctaggatatttgatcctgctcctcccgggaaaaggaaagtggttgtggctactaac
attgctgaggcttctttgactattgatgggatattttatgtcattgatccggggtttgct
aagcaaaatgtttataacccaaagcaaggtcttgattccttggtgataactccgatatca
caagcgtcagccaaacaaagagctggacgtgcagggcgtactggacctggaaagtgttat
cgtctttatactgagagtgcgtataggaatgagatgtctcctacttcaattccagagatt
caaaggataaatctgggtatgactactcttaacatgaaagctatgggcataaatgatctt
ctgtcatttgattttatggatccaccatcaccccaagcacttatttccgccatggagcag
ctttacagtcttggagcattggatgaagagggtcttctaaccaaattggggaggaaaatg
gctgaatttcctttggatccaccactgtccaagatgctgcttgccagtgttgaccttgga
tgtagcgatgagattttgaccataattgccatgatccagaccggcaatattttttacagg
cccagggagaaacaagcccaagcagatcagaaaagggcaaggtttttccagccagagggt
gaccatcttacattacttgctgtttatgaatcctggaaaaataaaaacttttctggaccc
tggtgttttgagaactttgttcaatctcgatcgttgagaagagcccaggatgtaaggaaa
caacttctcaccatcatggataagtacaaattggatgtggtgagtgctggaaaaaacttc
acaaagaccaggaaggccatcactgcagggttcttttttcatgcagctagaaaggacccc
caggaaggttacagaacactagttgagaatcagcctgtatatattcatccaagttcagct
ttgttccagaggcagccagactgggtcatataccatgagcttgtaatgacaactaaggaa
tatatgcgtgaggttacagtcatagaccccaagtggcttgttgaattggctccaagattc
tttaaagtgtcagatcctacaaagatgagcaaacggaagcgtcaagagcgtatcgaacca
ctttatgatagataccatgagccaaattcatggcgtttgagtaaacgccgtgcatga

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